chr4:56294070:> Detail (hg19)

Information

Genome

Assembly Position
hg19 chr4:56,294,070-56,413,076
hg38 chr4:55,427,903-55,546,909 

HGVS

Type Transcript Protein
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

[No Data.]

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 squamous cell carcinoma NA BeFree Detail
0.003 Cardiovascular Diseases The role of clock genes and circadian rhythm in the development of cardiovascula... BeFree,LHGDN 25972277 Detail
0.080 cholestasis NA RGD Detail
<0.001 Cluster Headache NA BeFree Detail
0.002 cocaine abuse NA GAD Detail
0.004 colorectal carcinoma Clock genes: their role in colorectal cancer. BeFree 24587674 Detail
0.004 colorectal carcinoma Core clock genes might be possible future biomarkers in colorectal cancer. BeFree 25418520 Detail
0.004 Mental Depression NA BeFree,GAD Detail
0.002 depressive disorder NA BeFree Detail
0.001 Diabetes Clock genes, pancreatic function, and diabetes. BeFree 25457619 Detail
0.001 diabetes mellitus Clock genes, pancreatic function, and diabetes. BeFree 25457619 Detail
0.001 Diabetes Mellitus, Non-Insulin-Dependent NA BeFree Detail
<0.001 Eating Disorders NA BeFree Detail
0.003 endometriosis NA BeFree,GAD Detail
0.005 Fatty Liver NA GAD,LHGDN Detail
<0.001 glioblastoma NA BeFree Detail
0.002 Glioma However, the molecular mechanisms of genes controlling circadian rhythm in gliom... BeFree 25313752 Detail
<0.001 Hay fever This study showed that allergen-induced surface CD203c expression on basophils i... BeFree 25443426 Detail
<0.001 Sensorineural Hearing Loss (disorder) The expression of circadian clock genes in peripheral blood (PB) leukocytes from... BeFree 26131842 Detail
<0.001 hepatitis C NA BeFree Detail
<0.001 heroin dependence NA BeFree Detail
0.081 Hypertensive disease Clock genes in hypertension: novel insights from rodent models. BeFree,RGD 25025868 Detail
0.081 Hypertensive disease Expression of circadian rhythm genes CLOCK, BMAL1, and PER1 in buccal epithelial... BeFree,RGD 25070164 Detail
<0.001 male infertility NA BeFree Detail
<0.001 Inflammatory Bowel Diseases NA BeFree Detail
<0.001 chronic lymphocytic leukemia NA BeFree Detail
<0.001 Myeloid Leukemia, Chronic NA BeFree Detail
<0.001 Liver neoplasms Taken together, our data show that an lncRNA, HULC, is responsible for the pertu... BeFree 25622901 Detail
<0.001 lymphoma NA BeFree Detail
<0.001 Single major depressive episode NA BeFree Detail
<0.001 melanoma NA BeFree Detail
<0.001 Metabolic Diseases NA BeFree Detail
<0.001 Neoplasm Metastasis Pairwise correlations between functionally-related clock genes (e.g., PER2-PER3 ... BeFree 25485508 Detail
<0.001 neuroblastoma NA BeFree Detail
<0.001 Nevus NA BeFree Detail
<0.001 Melanocytic nevus NA BeFree Detail
0.012 obesity To evaluate the association between 3111T/C polymorphism of the CLOCK gene and t... BeFree,GAD 24818524 Detail
<0.001 oligodendroglioma NA BeFree Detail
<0.001 Degenerative polyarthritis Clock gene expression in different synovial cells of patients with rheumatoid ar... BeFree 25109449 Detail
<0.001 Pituitary Diseases NA BeFree Detail
<0.001 Pneumococcal Infections NA BeFree Detail
<0.001 Q fever NA BeFree Detail
<0.001 restless legs syndrome Association between restless legs syndrome and CLOCK and NPAS2 gene polymorphism... BeFree 24824748 Detail
0.015 schizophrenia Association between restless legs syndrome and CLOCK and NPAS2 gene polymorphism... BeFree,GAD,LHGDN 24824748 Detail
0.015 schizophrenia Since stressful life events or increased vulnerability to stress are risk factor... BeFree,GAD,LHGDN 25135782 Detail
<0.001 Skin Neoplasms NA BeFree Detail
0.003 Sleep disturbances Screening of clock gene polymorphisms demonstrates association of a PER3 polymor... BeFree 25201053 Detail
<0.001 post-traumatic stress disorder Since stressful life events or increased vulnerability to stress are risk factor... BeFree 25135782 Detail
0.002 Thinness NA GAD Detail
0.003 Unipolar Depression Circadian dysregulation of clock genes: clues to rapid treatments in major depre... BeFree 25349171 Detail
0.002 Weight Gain NA GAD Detail
<0.001 seasonal affective disorder NA BeFree Detail
<0.001 gestational diabetes NA BeFree Detail
<0.001 Photophobia NA BeFree Detail
<0.001 Depressive Symptoms NA BeFree Detail
<0.001 Cutaneous Melanoma NA BeFree Detail
<0.001 esophageal carcinoma NA BeFree Detail
<0.001 adrenoleukodystrophy Taken together our data support a novel Cyp2e1-circadian clock protein mechanism... BeFree 25462064 Detail
<0.001 Tumor Progression Loss of circadian clock gene expression is associated with tumor progression in ... BeFree 25485508 Detail
<0.001 Jet Lag Syndrome NA BeFree Detail
<0.001 Premature aging syndrome NA BeFree Detail
<0.001 Dyslipidemias NA BeFree Detail
<0.001 Cancer of Head and Neck NA BeFree Detail
<0.001 anaplastic oligodendroglioma NA BeFree Detail
<0.001 Impaired cognition NA BeFree Detail
<0.001 Manic NA BeFree Detail
0.003 Malignant neoplasm of prostate NA BeFree,GAD Detail
<0.001 Hematologic Neoplasms NA BeFree Detail
0.001 delayed sleep phase syndrome NA BeFree Detail
0.002 Anorexia and bulimia syndrome NA GAD Detail
0.003 Overweight Study of the association between 3111T/C polymorphism of the CLOCK gene and the ... BeFree,GAD 24818524 Detail
<0.001 Sleep Apnea, Obstructive NA BeFree Detail
0.012 Metabolic syndrome X The circadian clock affects metabolic cycles, and there is a link between circad... BeFree,GAD 25391456 Detail
0.005 Mood Disorders NA BeFree,GAD Detail
<0.001 Early Awakening NA BeFree Detail
0.003 Malignant neoplasm of esophagus NA BeFree,GAD Detail
0.003 Carcinogenesis Dysfunction of molecular clockworks and cellular oscillators is involved in tumo... BeFree 24764658 Detail
<0.001 prostate carcinoma NA BeFree Detail
0.003 breast carcinoma In conclusion, the results of our population-based case-control study support a ... BeFree 25229211 Detail
0.003 breast carcinoma Loss of circadian clock gene expression is associated with tumor progression in ... BeFree 25485508 Detail
<0.001 colon carcinoma NA BeFree Detail
<0.001 Central neuroblastoma NA BeFree Detail
<0.001 Malignant neoplasm of kidney NA BeFree Detail
<0.001 Well Differentiated Oligodendroglioma NA BeFree Detail
<0.001 Hypersomnolence, Idiopathic NA BeFree Detail
<0.001 advanced sleep phase syndrome NA BeFree Detail
0.080 Hypoxia-Ischemia, Brain NA RGD Detail
<0.001 Smith-Magenis syndrome NA BeFree Detail
<0.001 malignant pleural mesothelioma NA BeFree Detail
<0.001 Circadian Rhythm Disorders These findings suggest that in addition to structural abnormalities, lesion stud... BeFree 25349171 Detail
0.015 Sleep Disorders Screening of clock gene polymorphisms demonstrates association of a PER3 polymor... BeFree,GAD 25201053 Detail
<0.001 Advanced sleep phase Polymorphisms in circadian clock genes have been associated with morningness-eve... BeFree 25201053 Detail
<0.001 Delayed sleep phase Polymorphisms in circadian clock genes have been associated with morningness-eve... BeFree 25201053 Detail
<0.001 Adult attention deficit hyperactivity disorder NA BeFree Detail
<0.001 winter depression NA BeFree Detail
0.004 Sleeplessness The expression of circadian clock genes in peripheral blood (PB) leukocytes from... BeFree,GAD 26131842 Detail
0.003 Malignant neoplasm of breast In women with three consecutive night shifts, a reduced risk of breast cancer wa... BeFree 23822714 Detail
<0.001 Squamous cell carcinoma of the head and neck NA BeFree Detail
<0.001 attention deficit hyperactivity disorder NA BeFree Detail
0.007 major depressive disorder Circadian dysregulation of clock genes: clues to rapid treatments in major depre... BeFree,GAD 25349171 Detail
<0.001 Mild cognitive disorder NA BeFree Detail
<0.001 Adenoma of large intestine Case-control study of the PERIOD3 clock gene length polymorphism and colorectal ... BeFree 25501848 Detail
0.003 breast carcinoma In women with three consecutive night shifts, a reduced risk of breast cancer wa... BeFree 23822714 Detail
<0.001 Postoperative confusion In this thesis we initially investigated whether the specific clock gene genotyp... BeFree 25186550 Detail
<0.001 renal carcinoma NA BeFree Detail
<0.001 Benign melanocytic nevus NA BeFree Detail
<0.001 Mammary Neoplasms NA BeFree Detail
<0.001 Hepatocarcinogenesis Taken together, our data show that an lncRNA, HULC, is responsible for the pertu... BeFree 25622901 Detail
0.003 colorectal cancer Clock genes: their role in colorectal cancer. BeFree 24587674 Detail
0.003 colorectal cancer Core clock genes might be possible future biomarkers in colorectal cancer. BeFree 25418520 Detail
<0.001 MAJOR AFFECTIVE DISORDER 2 NA BeFree Detail
<0.001 NEUROTICISM NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 1 NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 4 NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 5 NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 6 NA BeFree Detail
<0.001 liver carcinoma Taken together, our data show that an lncRNA, HULC, is responsible for the pertu... BeFree 25622901 Detail
0.003 bulimia nervosa NA BeFree,LHGDN Detail
<0.001 Major affective disorder 7 NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 8 NA BeFree Detail
<0.001 MAJOR AFFECTIVE DISORDER 9 NA BeFree Detail
0.002 Weight Gain Adverse Event NA GAD Detail
<0.001 High-functioning autism NA BeFree Detail
0.003 Sleep Wake Disorders NA LHGDN Detail
<0.001 alcohol use disorder NA BeFree Detail
0.001 Alcoholic Intoxication, Chronic NA BeFree Detail
0.001 Alzheimer's disease We compared development of AD-like symptoms in adult flies expressing Aβ peptide... BeFree 25171136 Detail
0.003 anorexia nervosa NA BeFree,LHGDN Detail
0.001 Anxiety Disorders NA BeFree Detail
<0.001 arteriosclerosis NA BeFree Detail
0.002 rheumatoid arthritis Clock gene expression in different synovial cells of patients with rheumatoid ar... BeFree 25109449 Detail
0.002 rheumatoid arthritis The circadian rhythm in expression of the clock genes PER2 and PER3 in CD14+ mon... BeFree 25535886 Detail
0.002 As If Personality NA GAD Detail
<0.001 asthma NA BeFree Detail
<0.001 atherosclerosis NA BeFree Detail
<0.001 autistic disorder NA BeFree Detail
<0.001 Autoimmune Diseases NA BeFree Detail
0.002 Mental disorders Animal models with mutations in circadian clock genes commonly show disturbances... BeFree 25135782 Detail
0.021 bipolar disorder Suicidal behavior in the context of disrupted rhythmicity in bipolar disorder--d... BeFree,GAD,LHGDN 25724486 Detail
<0.001 Depression, Bipolar NA BeFree Detail
<0.001 borderline personality disorder NA BeFree Detail
<0.001 Brain Diseases NA BeFree Detail
0.003 Malignant neoplasm of breast In conclusion, the results of our population-based case-control study support a ... BeFree 25229211 Detail
0.003 Malignant neoplasm of breast Loss of circadian clock gene expression is associated with tumor progression in ... BeFree 25485508 Detail
<0.001 bronchopulmonary dysplasia NA BeFree Detail
<0.001 renal cell carcinoma NA BeFree Detail
Annotation

Annotations

DescrptionSourceLinks
NA DisGeNET Detail
The role of clock genes and circadian rhythm in the development of cardiovascular diseases. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Clock genes: their role in colorectal cancer. DisGeNET Detail
Core clock genes might be possible future biomarkers in colorectal cancer. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Clock genes, pancreatic function, and diabetes. DisGeNET Detail
Clock genes, pancreatic function, and diabetes. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
However, the molecular mechanisms of genes controlling circadian rhythm in glioma cells have not bee... DisGeNET Detail
This study showed that allergen-induced surface CD203c expression on basophils in seasonal allergic ... DisGeNET Detail
The expression of circadian clock genes in peripheral blood (PB) leukocytes from 38 patients with SS... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Clock genes in hypertension: novel insights from rodent models. DisGeNET Detail
Expression of circadian rhythm genes CLOCK, BMAL1, and PER1 in buccal epithelial cells of patients w... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Taken together, our data show that an lncRNA, HULC, is responsible for the perturbations in circadia... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Pairwise correlations between functionally-related clock genes (e.g., PER2-PER3 and CRY2-PER3) were ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
To evaluate the association between 3111T/C polymorphism of the CLOCK gene and the presence of obesi... DisGeNET Detail
NA DisGeNET Detail
Clock gene expression in different synovial cells of patients with rheumatoid arthritis and osteoart... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Association between restless legs syndrome and CLOCK and NPAS2 gene polymorphisms in schizophrenia. DisGeNET Detail
Association between restless legs syndrome and CLOCK and NPAS2 gene polymorphisms in schizophrenia. DisGeNET Detail
Since stressful life events or increased vulnerability to stress are risk factors for multiple psych... DisGeNET Detail
NA DisGeNET Detail
Screening of clock gene polymorphisms demonstrates association of a PER3 polymorphism with morningne... DisGeNET Detail
Since stressful life events or increased vulnerability to stress are risk factors for multiple psych... DisGeNET Detail
NA DisGeNET Detail
Circadian dysregulation of clock genes: clues to rapid treatments in major depressive disorder. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Taken together our data support a novel Cyp2e1-circadian clock protein mechanism for alcohol-induced... DisGeNET Detail
Loss of circadian clock gene expression is associated with tumor progression in breast cancer. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Study of the association between 3111T/C polymorphism of the CLOCK gene and the presence of overweig... DisGeNET Detail
NA DisGeNET Detail
The circadian clock affects metabolic cycles, and there is a link between circadian clock genes and ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Dysfunction of molecular clockworks and cellular oscillators is involved in tumorigenesis, and alter... DisGeNET Detail
NA DisGeNET Detail
In conclusion, the results of our population-based case-control study support a putative role of the... DisGeNET Detail
Loss of circadian clock gene expression is associated with tumor progression in breast cancer. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
These findings suggest that in addition to structural abnormalities, lesion studies, and the large b... DisGeNET Detail
Screening of clock gene polymorphisms demonstrates association of a PER3 polymorphism with morningne... DisGeNET Detail
Polymorphisms in circadian clock genes have been associated with morningness-eveningness (diurnal) p... DisGeNET Detail
Polymorphisms in circadian clock genes have been associated with morningness-eveningness (diurnal) p... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The expression of circadian clock genes in peripheral blood (PB) leukocytes from 38 patients with SS... DisGeNET Detail
In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Circadian dysregulation of clock genes: clues to rapid treatments in major depressive disorder. DisGeNET Detail
NA DisGeNET Detail
Case-control study of the PERIOD3 clock gene length polymorphism and colorectal adenoma formation. DisGeNET Detail
In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... DisGeNET Detail
In this thesis we initially investigated whether the specific clock gene genotype PER(5/5) was assoc... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Taken together, our data show that an lncRNA, HULC, is responsible for the perturbations in circadia... DisGeNET Detail
Clock genes: their role in colorectal cancer. DisGeNET Detail
Core clock genes might be possible future biomarkers in colorectal cancer. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Taken together, our data show that an lncRNA, HULC, is responsible for the perturbations in circadia... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We compared development of AD-like symptoms in adult flies expressing Aβ peptides in the wild type b... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Clock gene expression in different synovial cells of patients with rheumatoid arthritis and osteoart... DisGeNET Detail
The circadian rhythm in expression of the clock genes PER2 and PER3 in CD14+ monocytes was lost in p... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Animal models with mutations in circadian clock genes commonly show disturbances in reward processin... DisGeNET Detail
Suicidal behavior in the context of disrupted rhythmicity in bipolar disorder--data from an associat... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
In conclusion, the results of our population-based case-control study support a putative role of the... DisGeNET Detail
Loss of circadian clock gene expression is associated with tumor progression in breast cancer. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs131113549 dbSNP
Genome
hg19
Position
chr4:56,294,070-56,413,076
Variant Type
snv
Genome browser