chr3:14186647:> Detail (hg19)

Information

Genome

Assembly Position
hg19 chr3:14,186,647-14,220,101
hg38 chr3:14,145,147-14,178,601 

HGVS

Type Transcript Protein
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

[No Data.]

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.002 renal cell carcinoma NA GAD Detail
0.008 squamous cell carcinoma NA BeFree,GAD,LHGDN Detail
0.003 Carcinoma, Transitional Cell NA BeFree,GAD Detail
0.002 Neoplastic Cell Transformation NA GAD Detail
0.002 Uterine Cervical Neoplasm NA GAD Detail
<0.001 cholelithiasis NA BeFree Detail
0.127 Chromosome Aberrations NA CTD_human,GAD Detail
0.084 Carcinoma of lung Furthermore, a significant effect of SNPs in nucleotide excision repair pathway ... BeFree 21739480 Detail
0.002 Congenital chromosomal disease NA BeFree Detail
0.044 Malignant neoplasm of lung Furthermore, a significant effect of SNPs in nucleotide excision repair pathway ... BeFree 21739480 Detail
0.002 Cocarcinogenesis NA GAD Detail
<0.001 Cockayne syndrome NA BeFree Detail
0.007 Colorectal Neoplasms NA GAD,LHGDN Detail
0.002 Deafness NA GAD Detail
0.009 DNA Damage NA GAD Detail
0.003 Esophageal Neoplasms NA BeFree,GAD Detail
0.003 glioblastoma NA LHGDN Detail
0.002 Glioma NA GAD Detail
0.005 Head and Neck Neoplasms NA GAD Detail
0.002 Hearing Loss, Partial NA GAD Detail
<0.001 Hemangiosarcoma NA BeFree Detail
<0.001 Triple Negative Breast Neoplasms Our results suggest that TNBC was associated with 6 DNA-repair nsSNPs, ERCC4 R41... BeFree 25023197 Detail
0.023 Malignant neoplasm of breast Using data/samples collected from the first 752 Caucasians and 141 African-Ameri... BeFree 18701435 Detail
0.002 breast carcinoma Using data/samples collected from the first 752 Caucasians and 141 African-Ameri... BeFree 18701435 Detail
0.002 hepatitis B NA GAD Detail
0.002 hepatitis C NA GAD Detail
<0.001 HIV Infections NA BeFree Detail
0.002 Hodgkin Disease NA GAD Detail
<0.001 Huntington disease NA BeFree Detail
0.002 male infertility NA GAD Detail
<0.001 keratoacanthoma NA BeFree Detail
<0.001 actinic keratosis NA BeFree Detail
0.005 Kidney Neoplasm NA GAD Detail
0.005 Laryngeal neoplasm NA GAD Detail
0.044 Malignant neoplasm of lung We investigated the relationship between polymorphisms in two NER genes, XPC (po... BeFree 17705814 Detail
0.084 Carcinoma of lung We investigated the relationship between polymorphisms in two NER genes, XPC (po... BeFree 17705814 Detail
0.006 Paroxysmal atrial tachycardia Nine known single nucleotide polymorphisms (SNPs) in five common DNA repair gene... BeFree 16373199 Detail
0.002 Congenital chromosomal disease We analysed the associations between genetic polymorphisms in genes coding for D... BeFree 14729591 Detail
0.002 chronic lymphocytic leukemia NA GAD Detail
0.003 Leukemia, Myelocytic, Acute NA BeFree,GAD Detail
0.003 Leukemia, Myeloid, Chronic-Phase NA BeFree,GAD Detail
<0.001 leukopenia With respect to hematological and nonhematological toxicities, SNPs in drug tran... BeFree 25340731 Detail
0.008 Liver neoplasms NA BeFree,GAD Detail
0.002 Chronic Obstructive Airway Disease NA GAD Detail
0.134 Lung Neoplasms NA BeFree,CTD_human,GAD,LHGDN Detail
0.002 Lymphoma, Follicular NA GAD Detail
<0.001 Malignant neoplasm of stomach NA BeFree Detail
0.014 melanoma NA BeFree,GAD Detail
0.002 Meningeal Neoplasms NA GAD Detail
0.002 meningioma NA GAD Detail
0.002 multiple sclerosis NA GAD Detail
0.002 Nasopharyngeal Neoplasms NA GAD Detail
<0.001 Neoplasm Metastasis NA BeFree Detail
0.002 acoustic neuroma NA GAD Detail
<0.001 neutropenia With respect to hematological and nonhematological toxicities, SNPs in drug tran... BeFree 25340731 Detail
0.006 Malignant neoplasm of prostate This is the first report on the studies of XPC and XRCC1 Arg194Trp polymorphisms... BeFree 17196815 Detail
0.002 prostate carcinoma This is the first report on the studies of XPC and XRCC1 Arg194Trp polymorphisms... BeFree 17196815 Detail
0.003 oligospermia NA BeFree,GAD Detail
0.003 osteosarcoma NA BeFree,GAD Detail
<0.001 ovarian carcinoma NA BeFree Detail
0.005 Pancreatic Neoplasm NA GAD Detail
0.006 Paroxysmal atrial tachycardia NA BeFree Detail
0.005 Skin Neoplasms NA BeFree,GAD Detail
0.006 Carcinoma of bladder We examined the associations between bladder cancer and 7 polymorphisms from 5 g... BeFree 22927776 Detail
0.032 Malignant neoplasm of urinary bladder We examined the associations between bladder cancer and 7 polymorphisms from 5 g... BeFree 22927776 Detail
0.006 Paroxysmal atrial tachycardia We examined the associations between bladder cancer and 7 polymorphisms from 5 g... BeFree 22927776 Detail
0.007 Stomach Neoplasms NA GAD Detail
0.002 Ureteral Neoplasms NA GAD Detail
<0.001 Xeroderma NA BeFree Detail
0.021 xeroderma pigmentosum We, particularly, developed the correction of XP-C skin cells using the fidelity... BeFree,LHGDN 26255934 Detail
0.002 Helicobacter Infections NA GAD Detail
0.002 diffuse large B-cell lymphoma NA GAD Detail
<0.001 Sensory neuropathy With respect to hematological and nonhematological toxicities, SNPs in drug tran... BeFree 25340731 Detail
<0.001 Cutaneous Melanoma NA BeFree Detail
0.121 Adenocarcinoma of lung (disorder) NA BeFree,CTD_human Detail
<0.001 esophageal carcinoma NA BeFree Detail
0.005 Malignant neoplasm of mouth NA GAD Detail
0.569 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C Several polymorphisms (Lys(939)Gln, PAT+/- and Ala(499)Val) in the DNA nuclear e... BeFree 18771913 Detail
0.003 adenoma Smoking was related to adenoma risk and XPC polymorphisms (R492H, A499V, K939Q) ... BeFree 16492920 Detail
0.003 colorectal carcinoma Individuals with variant genotypes of XPC Ala499Val appeared to be associated wi... BeFree 25355595 Detail
0.007 colorectal cancer XPC Lys939Gln and Ala499Val polymorphisms in colorectal cancer susceptibility: a... BeFree 24385304 Detail
0.003 colorectal carcinoma XPC Lys939Gln and Ala499Val polymorphisms in colorectal cancer susceptibility: a... BeFree 24385304 Detail
0.006 Paroxysmal atrial tachycardia Numerous studies have investigated the association between three polymorphisms (... BeFree 23918308 Detail
0.032 Malignant neoplasm of urinary bladder Individuals homozygous for the variant allele of XPC c.1496C &gt; T (p.Ala499Val... BeFree 21689419 Detail
0.007 colorectal cancer Individuals with variant genotypes of XPC Ala499Val appeared to be associated wi... BeFree 25355595 Detail
<0.001 gallbladder adenocarcinoma Ala499Val (C&gt;T) and Lys939Gln (A&gt;C) polymorphisms of the XPC gene: their c... BeFree 21113018 Detail
<0.001 Malignant neoplasm of nasopharynx NA BeFree Detail
0.006 Carcinoma of bladder Individuals homozygous for the variant allele of XPC c.1496C &gt; T (p.Ala499Val... BeFree 21689419 Detail
0.006 Paroxysmal atrial tachycardia This meta-analysis including 13 case-control studies evaluated the associations ... BeFree 23381646 Detail
0.006 Paroxysmal atrial tachycardia This meta-analysis shows that the XPC PAT and Ala499Val polymorphisms may be ass... BeFree 24338715 Detail
0.006 Paroxysmal atrial tachycardia The overall genotype and allelotype distributions of XPC intron 9 PAT(+/-) and e... BeFree 17653764 Detail
<0.001 Malignant neoplasm of gallbladder NA BeFree Detail
<0.001 Tumor Progression NA BeFree Detail
<0.001 Coronavirus Infections NA BeFree Detail
<0.001 Neurologic Symptoms NA BeFree Detail
<0.001 gallbladder carcinoma NA BeFree Detail
<0.001 pancreatic carcinoma NA BeFree Detail
<0.001 Cancer of Nasopharynx NA BeFree Detail
0.044 Malignant neoplasm of lung We found a significantly increased risk of lung cancer development in XPD genoty... BeFree,GAD 25300687 Detail
<0.001 Xeroderma pigmentosum, group A NA BeFree Detail
<0.001 Spastic syndrome Expression of specific TALE nuclease in the presence of a repair matrix containi... BeFree 26255934 Detail
0.005 Cancer of Head and Neck NA BeFree,GAD Detail
<0.001 Squamous cell carcinoma of esophagus NA BeFree Detail
<0.001 Adenocarcinoma Of Esophagus NA BeFree Detail
<0.001 gallbladder adenocarcinoma NA BeFree Detail
<0.001 Squamous cell carcinoma of oropharynx NA BeFree Detail
0.003 Malignant neoplasm of pancreas NA BeFree,GAD Detail
0.006 Malignant neoplasm of prostate NA BeFree,GAD Detail
0.003 endometrial carcinoma NA BeFree,GAD Detail
0.005 Malignant neoplasm of esophagus NA BeFree,GAD Detail
<0.001 Squamous cell carcinoma of skin We report that regional disparities in mutation density are virtually abolished ... BeFree 25456125 Detail
<0.001 Carcinoma of larynx NA BeFree Detail
0.002 Carcinogenesis NA BeFree Detail
0.002 prostate carcinoma NA BeFree Detail
<0.001 Epithelial ovarian cancer NA BeFree Detail
0.002 breast carcinoma NA BeFree Detail
0.084 Carcinoma of lung We found a significantly increased risk of lung cancer development in XPD genoty... BeFree,MGD 25300687 Detail
<0.001 stomach carcinoma NA BeFree Detail
0.006 Carcinoma of bladder NA BeFree Detail
0.003 skin carcinoma NA BeFree,GAD Detail
<0.001 Cockayne Syndrome, Type II Surprisingly, DSB formation requires the transcription-coupled nucleotide excisi... BeFree 25435140 Detail
<0.001 cholecystolithiasis NA BeFree Detail
0.003 Malignant neoplasm of ovary NA BeFree,GAD Detail
<0.001 Squamous cell carcinoma of the head and neck NA BeFree Detail
<0.001 Adenoma of large intestine NA BeFree Detail
<0.001 gastric cardia adenocarcinoma NA BeFree Detail
0.002 hearing impairment NA GAD Detail
0.120 Micronuclei, Chromosome-Defective NA CTD_human Detail
0.002 Mammary Neoplasms NA GAD Detail
<0.001 Skin Carcinogenesis NA BeFree Detail
<0.001 uterine corpus cancer NA BeFree Detail
<0.001 Trichothiodystrophy Syndromes NA BeFree Detail
0.008 liver carcinoma NA BeFree,GAD Detail
<0.001 Nasopharyngeal carcinoma NA BeFree Detail
0.002 Congenital chromosomal disease Our study is focused on the extent of any such chromosomal aberrations with resp... BeFree 21858514 Detail
<0.001 Triple Negative Breast Neoplasms Our results suggest that TNBC was associated with 6 DNA-repair nsSNPs, ERCC4 rs1... BeFree 25023197 Detail
<0.001 Experimental Organism Basal Cell Carcinoma When considering sex and SNPs, men with the A-allele in XPC intron 11 C/A have b... BeFree 25209577 Detail
<0.001 Experimental Organism Basal Cell Carcinoma Xeroderma pigmentosum complementation group C protein (XPC) expression in basal ... BeFree 25600527 Detail
0.002 Hearing Loss NA GAD Detail
0.018 adenocarcinoma NA BeFree,GAD,LHGDN Detail
0.003 adenoma NA BeFree,LHGDN Detail
0.002 Alcoholic Intoxication, Chronic NA GAD Detail
0.120 Amino Acid Metabolism, Inborn Errors NA CTD_human Detail
0.120 autistic disorder NA CTD_human Detail
0.003 azoospermia NA BeFree,GAD Detail
0.032 Malignant neoplasm of urinary bladder NA BeFree,GAD Detail
0.009 Bladder Neoplasm NA BeFree,LHGDN Detail
0.002 Bone neoplasms NA GAD Detail
0.002 Brain Neoplasms NA GAD Detail
0.023 Malignant neoplasm of breast NA BeFree,GAD Detail
0.002 Breast Diseases NA GAD Detail
<0.001 Malignant neoplasm of endometrium NA BeFree Detail
<0.001 Malignant neoplasm of larynx NA BeFree Detail
0.003 Malignant neoplasm of skin Individuals carrying a mutation in XPC genes exhibit marked photosensitivity and... BeFree 25600527 Detail
0.003 Non-small cell lung carcinoma NA BeFree,GAD Detail
<0.001 Small cell carcinoma of esophagus We retrospectively examined whether there was an association between the selecte... BeFree 25374063 Detail
Annotation

Annotations

DescrptionSourceLinks
NA DisGeNET Detail
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Furthermore, a significant effect of SNPs in nucleotide excision repair pathway on lung cancer survi... DisGeNET Detail
NA DisGeNET Detail
Furthermore, a significant effect of SNPs in nucleotide excision repair pathway on lung cancer survi... DisGeNET Detail
NA DisGeNET Detail
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Our results suggest that TNBC was associated with 6 DNA-repair nsSNPs, ERCC4 R415Q (rs1800067), MSH3... DisGeNET Detail
Using data/samples collected from the first 752 Caucasians and 141 African-Americans in an ongoing c... DisGeNET Detail
Using data/samples collected from the first 752 Caucasians and 141 African-Americans in an ongoing c... DisGeNET Detail
NA DisGeNET Detail
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We investigated the relationship between polymorphisms in two NER genes, XPC (poly (AT) insertion/de... DisGeNET Detail
We investigated the relationship between polymorphisms in two NER genes, XPC (poly (AT) insertion/de... DisGeNET Detail
Nine known single nucleotide polymorphisms (SNPs) in five common DNA repair genes were investigated:... DisGeNET Detail
We analysed the associations between genetic polymorphisms in genes coding for DNA repair enzymes XP... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
With respect to hematological and nonhematological toxicities, SNPs in drug transporters (ABCB1 and ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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With respect to hematological and nonhematological toxicities, SNPs in drug transporters (ABCB1 and ... DisGeNET Detail
This is the first report on the studies of XPC and XRCC1 Arg194Trp polymorphisms in PC, and our pres... DisGeNET Detail
This is the first report on the studies of XPC and XRCC1 Arg194Trp polymorphisms in PC, and our pres... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We examined the associations between bladder cancer and 7 polymorphisms from 5 genes involved in the... DisGeNET Detail
We examined the associations between bladder cancer and 7 polymorphisms from 5 genes involved in the... DisGeNET Detail
We examined the associations between bladder cancer and 7 polymorphisms from 5 genes involved in the... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We, particularly, developed the correction of XP-C skin cells using the fidelity of the homologous r... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
With respect to hematological and nonhematological toxicities, SNPs in drug transporters (ABCB1 and ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Several polymorphisms (Lys(939)Gln, PAT+/- and Ala(499)Val) in the DNA nuclear excision repair gene ... DisGeNET Detail
Smoking was related to adenoma risk and XPC polymorphisms (R492H, A499V, K939Q) modified these effec... DisGeNET Detail
Individuals with variant genotypes of XPC Ala499Val appeared to be associated with the increased ris... DisGeNET Detail
XPC Lys939Gln and Ala499Val polymorphisms in colorectal cancer susceptibility: a meta-analysis of ca... DisGeNET Detail
XPC Lys939Gln and Ala499Val polymorphisms in colorectal cancer susceptibility: a meta-analysis of ca... DisGeNET Detail
Numerous studies have investigated the association between three polymorphisms (Lys939Gln, Ala499Val... DisGeNET Detail
Individuals homozygous for the variant allele of XPC c.1496C &gt; T (p.Ala499Val) were shown in a la... DisGeNET Detail
Individuals with variant genotypes of XPC Ala499Val appeared to be associated with the increased ris... DisGeNET Detail
Ala499Val (C&gt;T) and Lys939Gln (A&gt;C) polymorphisms of the XPC gene: their correlation with the ... DisGeNET Detail
NA DisGeNET Detail
Individuals homozygous for the variant allele of XPC c.1496C &gt; T (p.Ala499Val) were shown in a la... DisGeNET Detail
This meta-analysis including 13 case-control studies evaluated the associations between three common... DisGeNET Detail
This meta-analysis shows that the XPC PAT and Ala499Val polymorphisms may be associated with an incr... DisGeNET Detail
The overall genotype and allelotype distributions of XPC intron 9 PAT(+/-) and exon 15 Lys939Gln and... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We found a significantly increased risk of lung cancer development in XPD genotype Lys/Gln (OR=1.94;... DisGeNET Detail
NA DisGeNET Detail
Expression of specific TALE nuclease in the presence of a repair matrix containing a long stretch of... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We report that regional disparities in mutation density are virtually abolished within transcription... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We found a significantly increased risk of lung cancer development in XPD genotype Lys/Gln (OR=1.94;... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Surprisingly, DSB formation requires the transcription-coupled nucleotide excision repair (TC-NER) f... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Our study is focused on the extent of any such chromosomal aberrations with respect to chromium leve... DisGeNET Detail
Our results suggest that TNBC was associated with 6 DNA-repair nsSNPs, ERCC4 rs1800067>R415Q (rs1800... DisGeNET Detail
When considering sex and SNPs, men with the A-allele in XPC intron 11 C/A have been found to have a ... DisGeNET Detail
Xeroderma pigmentosum complementation group C protein (XPC) expression in basal cell carcinoma. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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Individuals carrying a mutation in XPC genes exhibit marked photosensitivity and increased occurrenc... DisGeNET Detail
NA DisGeNET Detail
We retrospectively examined whether there was an association between the selected six single nucleot... DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs386493716 dbSNP
Genome
hg19
Position
chr3:14,186,647-14,220,101
Variant Type
snv
Genome browser