chr20:10218830:> Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr20:10,199,478-10,288,906 |
| hg38 | chr20:10,218,830-10,308,258 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Carcinoma, Transitional Cell | NA | BeFree | Detail | |
| 0.002 | Cardiovascular Diseases | NA | GAD | Detail | |
| <0.001 | Congenital chromosomal disease | NA | BeFree | Detail | |
| 0.002 | Congenital ocular coloboma (disorder) | NA | BeFree | Detail | |
| 0.120 | depressive disorder | NA | CTD_human | Detail | |
| 0.120 | Diabetes Mellitus, Experimental | NA | CTD_human | Detail | |
| 0.120 | Diabetes Mellitus, Non-Insulin-Dependent | NA | CTD_human | Detail | |
| 0.003 | Down syndrome | NA | BeFree,LHGDN | Detail | |
| 0.002 | epilepsy | NA | GAD | Detail | |
| <0.001 | fibromyalgia | Synaptosomal-associated protein 25 (Snap-25) gene polymorphism frequency in fibr... | BeFree | 24885975 | Detail |
| <0.001 | congestive heart failure | NA | BeFree | Detail | |
| <0.001 | Atrial Septal Defects | NA | BeFree | Detail | |
| <0.001 | HIV Infections | NA | BeFree | Detail | |
| <0.001 | Hunger | NA | BeFree | Detail | |
| <0.001 | leukemia | NA | BeFree | Detail | |
| 0.001 | Acute lymphocytic leukemia | NA | BeFree | Detail | |
| <0.001 | Leukemia, T-Cell | NA | BeFree | Detail | |
| <0.001 | Adult T-Cell Lymphoma/Leukemia | NA | BeFree | Detail | |
| 0.001 | lymphoma | NA | BeFree | Detail | |
| 0.003 | Metabolic syndrome X | For the SNP genotypes of rs362551 (SNAP25), rs3818569 (RXRG), rs1479355, rs15700... | BeFree | 25867398 | Detail |
| 0.003 | Mental Retardation | NA | BeFree,GAD | Detail | |
| 0.002 | narcolepsy | NA | GAD | Detail | |
| <0.001 | nervous system disorder | NA | BeFree | Detail | |
| <0.001 | neuroblastoma | NA | BeFree | Detail | |
| <0.001 | Olivopontocerebellar Atrophies | NA | BeFree | Detail | |
| <0.001 | oppositional defiant disorder | NA | BeFree | Detail | |
| 0.002 | osteoporosis | NA | GAD | Detail | |
| 0.003 | Parathyroid Neoplasms | NA | LHGDN | Detail | |
| <0.001 | pheochromocytoma | NA | BeFree | Detail | |
| 0.003 | prolactinoma | NA | LHGDN | Detail | |
| 0.121 | Psychotic Disorders | We performed a large-scale case-control study to test the association between SN... | BeFree,CTD_human | 25650683 | Detail |
| 0.002 | schizoaffective disorder | NA | GAD | Detail | |
| 0.098 | schizophrenia | SNAP25 is associated with schizophrenia and major depressive disorder in the Han... | BeFree,GAD,LHGDN,MGD | 25650683 | Detail |
| 0.005 | Tobacco use disorder | NA | GAD | Detail | |
| <0.001 | Unipolar Depression | SNAP25 is associated with schizophrenia and major depressive disorder in the Han... | BeFree | 25650683 | Detail |
| 0.005 | Weight Gain | NA | GAD | Detail | |
| <0.001 | T-Cell Lymphoma | NA | BeFree | Detail | |
| <0.001 | Alagille syndrome | NA | BeFree | Detail | |
| <0.001 | Dermatitis, Phototoxic | NA | BeFree | Detail | |
| <0.001 | Ki-1+ Anaplastic Large Cell Lymphoma | NA | BeFree | Detail | |
| <0.001 | Rhabdoid Tumor | NA | BeFree | Detail | |
| <0.001 | pancreatic carcinoma | NA | BeFree | Detail | |
| <0.001 | Pick Disease of the Brain | NA | BeFree | Detail | |
| 0.120 | Behavioral tic | NA | CTD_human | Detail | |
| <0.001 | frontotemporal dementia | NA | BeFree | Detail | |
| <0.001 | Impaired cognition | NA | BeFree | Detail | |
| 0.002 | Complications of Diabetes Mellitus | NA | GAD | Detail | |
| <0.001 | Acute alcoholic intoxication | NA | BeFree | Detail | |
| <0.001 | Inattention | NA | BeFree | Detail | |
| 0.001 | Carcinoma of bladder | NA | BeFree | Detail | |
| <0.001 | Central neuroblastoma | NA | BeFree | Detail | |
| <0.001 | Frontotemporal Lobar Degeneration | NA | BeFree | Detail | |
| 0.120 | Neuromuscular Manifestations | NA | CTD_human | Detail | |
| 0.047 | attention deficit hyperactivity disorder | There was a significant association between the 1065 T>G of SNAP-25 gene and ORO... | BeFree,GAD | 25229170 | Detail |
| 0.047 | attention deficit hyperactivity disorder | We genotyped eight single nucleotide polymorphisms (SNP) of Syntaxin 1A (STX1A),... | BeFree,GAD | 25445064 | Detail |
| 0.047 | attention deficit hyperactivity disorder | Many previous studies have reported the SNAP25 gene to be significantly associat... | BeFree,GAD | 25650683 | Detail |
| <0.001 | major depressive disorder | SNAP25 is associated with schizophrenia and major depressive disorder in the Han... | BeFree | 25650683 | Detail |
| <0.001 | Xenograft Model | NA | BeFree | Detail | |
| <0.001 | Phototoxicity | NA | BeFree | Detail | |
| <0.001 | NEUROTICISM | NA | BeFree | Detail | |
| 0.001 | Philadelphia chromosome-positive acute lymphoblastic leukemia | NA | BeFree | Detail | |
| 0.002 | Precursor Cell Lymphoblastic Leukemia Lymphoma | NA | BeFree | Detail | |
| 0.005 | Weight Gain Adverse Event | NA | GAD | Detail | |
| <0.001 | Plaque, Amyloid | NA | BeFree | Detail | |
| <0.001 | intellectual disability | NA | BeFree | Detail | |
| <0.001 | acute pancreatitis | NA | BeFree | Detail | |
| 0.003 | adenoma | NA | BeFree,LHGDN | Detail | |
| <0.001 | Alcoholic Intoxication | NA | BeFree | Detail | |
| <0.001 | Alzheimer's disease | Possible association between SNAP-25 single nucleotide polymorphisms and alterat... | BeFree | 25024311 | Detail |
| <0.001 | amyotrophic lateral sclerosis | NA | BeFree | Detail | |
| 0.002 | As If Personality | NA | GAD | Detail | |
| <0.001 | Ataxia | NA | BeFree | Detail | |
| <0.001 | ataxia telangiectasia | NA | BeFree | Detail | |
| <0.001 | Ataxias, Hereditary | NA | BeFree | Detail | |
| <0.001 | autistic disorder | The expression of ZNF804A (p = 0.009) and SNAP25 (p = 0.009) were reduced in the... | BeFree | 24866414 | Detail |
| <0.001 | autistic disorder | Association between SNAP-25 gene polymorphisms and cognition in autism: function... | BeFree | 25629685 | Detail |
| 0.001 | Mental disorders | Our study showed increased SNAP-25 Ddel T/C genotype in FMS patients compared to... | BeFree | 24885975 | Detail |
| 0.001 | Mental disorders | We performed a large-scale case-control study to test the association between SN... | BeFree | 25650683 | Detail |
| 0.123 | bipolar disorder | NA | BeFree,CTD_human,GAD | Detail | |
| <0.001 | Malignant neoplasm of urinary bladder | NA | BeFree | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Synaptosomal-associated protein 25 (Snap-25) gene polymorphism frequency in fibromyalgia syndrome an... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| For the SNP genotypes of rs362551 (SNAP25), rs3818569 (RXRG), rs1479355, rs1570070 (IGF2R), and rs91... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| We performed a large-scale case-control study to test the association between SNAP25 and 2 major men... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| SNAP25 is associated with schizophrenia and major depressive disorder in the Han Chinese population. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| SNAP25 is associated with schizophrenia and major depressive disorder in the Han Chinese population. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| There was a significant association between the 1065 T>G of SNAP-25 gene and OROS MPH response, with... | DisGeNET | Detail |
| We genotyped eight single nucleotide polymorphisms (SNP) of Syntaxin 1A (STX1A), vesicle-associated ... | DisGeNET | Detail |
| Many previous studies have reported the SNAP25 gene to be significantly associated with attention-de... | DisGeNET | Detail |
| SNAP25 is associated with schizophrenia and major depressive disorder in the Han Chinese population. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Possible association between SNAP-25 single nucleotide polymorphisms and alterations of categorical ... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| The expression of ZNF804A (p = 0.009) and SNAP25 (p = 0.009) were reduced in the anterior cingulate ... | DisGeNET | Detail |
| Association between SNAP-25 gene polymorphisms and cognition in autism: functional consequences and ... | DisGeNET | Detail |
| Our study showed increased SNAP-25 Ddel T/C genotype in FMS patients compared to the control group, ... | DisGeNET | Detail |
| We performed a large-scale case-control study to test the association between SNAP25 and 2 major men... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs3818569 dbSNP
- Genome
- hg38
- Position
- chr20:10,218,830-10,308,258
- Variant Type
- snv
Genome browser