chr21:46918115:> Detail (hg19)

Information

Genome

Assembly Position
hg19 chr21:46,918,115-46,983,029
hg38 chr21:45,498,201-45,563,115 

HGVS

Type Transcript Protein
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

[No Data.]

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 squamous cell carcinoma NA BeFree Detail
<0.001 intracranial aneurysm NA BeFree Detail
<0.001 cerebral infarction We selected three known RFC-1 polymorphisms (-43C>T, 80A>G, 696T>C) and investig... BeFree 25659099 Detail
0.002 brain ischemia NA GAD Detail
0.125 cleft lip NA BeFree,CTD_human,GAD Detail
0.125 cleft palate NA CTD_human,GAD Detail
0.002 ulcerative colitis NA GAD Detail
0.120 Colonic Neoplasms NA CTD_human Detail
0.001 colorectal carcinoma In conclusion, this is the first study to simultaneously evaluate both DNA methy... BeFree 25697897 Detail
0.123 Colorectal Neoplasms NA CTD_human,LHGDN Detail
0.003 Coronary heart disease NA BeFree,GAD Detail
0.002 Crohn Disease NA GAD Detail
0.135 Down syndrome NA BeFree,CTD_human,GAD,LHGDN Detail
0.002 drug allergy NA GAD Detail
0.003 Folic Acid Deficiency NA BeFree,GAD Detail
0.003 congenital heart defects NA BeFree,GAD Detail
0.002 Heart Septal Defects NA GAD Detail
0.002 Hyperparathyroidism, Secondary NA GAD Detail
<0.001 Hypertensive disease NA BeFree Detail
0.002 Female infertility NA GAD Detail
0.002 Insulin resistance NA GAD Detail
0.005 leukemia NA BeFree,GAD,LHGDN Detail
0.003 Acute lymphocytic leukemia Effects of a microRNA binding site polymorphism in SLC19A1 on methotrexate conce... BeFree 24927955 Detail
<0.001 leukopenia NA BeFree Detail
0.002 Chronic Obstructive Airway Disease NA GAD Detail
0.005 Lung Neoplasms NA GAD,LHGDN Detail
0.006 lymphoma NA BeFree,GAD,LHGDN Detail
0.002 Lymphoma, Follicular NA GAD Detail
0.005 Lymphoma, Non-Hodgkin NA BeFree,GAD Detail
0.003 Malignant neoplasm of stomach NA BeFree,GAD Detail
0.003 Meningomyelocele NA BeFree,GAD Detail
<0.001 Neoplasm Metastasis NA BeFree Detail
<0.001 nephroblastoma RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with ... BeFree 25536437 Detail
0.120 nervous system disorder NA CTD_human Detail
0.031 Neural Tube Defects NA GAD,LHGDN Detail
<0.001 neuroblastoma Our results suggest that individuals carriers of genotype AA for the SLC19A1 gen... BeFree 24771227 Detail
<0.001 neuroblastoma RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with ... BeFree 25536437 Detail
0.007 osteosarcoma NA BeFree,LHGDN Detail
0.002 Pregnancy Complications, Cardiovascular NA GAD Detail
<0.001 retinoblastoma NA BeFree Detail
0.002 Stomach Neoplasms NA GAD Detail
0.005 Cerebrovascular accident We selected three known RFC-1 polymorphisms (-43C>T, 80A>G, 696T>C) and investig... BeFree,GAD 25659099 Detail
0.003 thrombosis NA LHGDN Detail
0.120 Adverse reaction to drug NA CTD_human Detail
0.002 B-Cell Lymphomas NA GAD Detail
0.002 diffuse large B-cell lymphoma NA GAD Detail
<0.001 Lymphoma, Large-Cell, Follicular NA BeFree Detail
0.002 T-Cell Lymphoma NA GAD Detail
<0.001 spina bifida occulta NA BeFree Detail
0.008 spina bifida NA BeFree,GAD,LHGDN Detail
0.002 Premature Birth NA GAD Detail
0.002 Aortic Aneurysm, Abdominal NA GAD Detail
<0.001 Tumor Progression NA BeFree Detail
0.010 Malignant neoplasm of lung NA BeFree,GAD Detail
0.002 Oxidative Stress NA GAD Detail
<0.001 Metastatic osteosarcoma NA BeFree Detail
<0.001 Cancer of Head and Neck NA BeFree Detail
<0.001 Primary central nervous system lymphoma NA BeFree Detail
<0.001 Impaired cognition NA BeFree Detail
0.005 Malignant neoplasm of prostate NA GAD Detail
<0.001 Hematologic Neoplasms NA BeFree Detail
0.080 Chronic Kidney Insufficiency NA RGD Detail
<0.001 Malignant neoplasm of esophagus NA BeFree Detail
0.007 Methotrexate poisoning NA GAD Detail
<0.001 Osteosarcoma of bone NA BeFree Detail
<0.001 Carcinoma of larynx NA BeFree Detail
0.003 hyperhomocysteinemia NA BeFree,GAD Detail
0.003 breast carcinoma A number of these SNPs, specifically in genes including MTR, MTRR, SHMT1, TYMS a... BeFree 25598430 Detail
<0.001 Carcinoma of lung NA BeFree Detail
<0.001 extranodal lymphoma NA BeFree Detail
<0.001 stomach carcinoma NA BeFree Detail
<0.001 Carcinoma of bladder NA BeFree Detail
<0.001 Central neuroblastoma Our results suggest that individuals carriers of genotype AA for the SLC19A1 gen... BeFree 24771227 Detail
<0.001 Central neuroblastoma RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with ... BeFree 25536437 Detail
<0.001 adult acute lymphocytic leukemia NA BeFree Detail
<0.001 brain infarction Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stro... BeFree 25659099 Detail
0.002 Congenital omphalocele NA GAD Detail
<0.001 Cleft lip with or without cleft palate RFC1 and non-syndromic cleft lip with or without cleft palate: an association ba... BeFree 24942095 Detail
<0.001 Acute GVH disease While donor single nucleotide polymorphisms of dihydrofolate reductase and solut... BeFree 25425682 Detail
0.003 Acute lymphocytic leukemia We investigated preliminarily whether methylenetetrahydrofolate reductase (MTHFR... BeFree 18458567 Detail
0.003 hyperhomocysteinemia To the best of our knowledge, this is the first family with multiple AIS patient... BeFree 18958479 Detail
<0.001 retinoblastoma A case-control study of 72 retinoblastoma cases and 98 cancer-free children cont... BeFree 20310006 Detail
0.003 coronary artery disease In view of growing body of evidence favouring the association of aberrations in ... BeFree 22147344 Detail
0.003 Acute lymphocytic leukemia Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C142... BeFree 22838948 Detail
0.120 adenoma Five SNPs in the SLC19A1 (RFC1) gene: rs1051266 (G80A), rs283895, rs2236484, rs1... BeFree 21274745 Detail
0.020 rheumatoid arthritis Frequencies of MTHFR C677T and A1298C were similar to those reported in Japanese... BeFree 17965559 Detail
0.003 Coronary heart disease Compound mutants for (MTHFD-G1958A, MTHFR-C677T and MTR-A2756G) and (MTHFD-G1958... BeFree 23701284 Detail
<0.001 Squamous cell carcinoma of the head and neck A80G polymorphism of reduced folate carrier 1 (RFC1) gene and head and neck squa... BeFree 20661649 Detail
<0.001 Ischemic stroke Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stro... BeFree 25659099 Detail
0.005 Lymphoma, Non-Hodgkin The polymorphisms examined and haplotypes generated included thymidylate synthas... BeFree 15198953 Detail
0.120 autistic disorder Subsequent log linear analysis of the RFC1 A80G genotype within family trios rev... BeFree 20468076 Detail
0.006 Malignant neoplasm of breast Conversely, for women over 50, the risk of breast cancer development was statist... BeFree 22134752 Detail
0.001 Leukemia, Lymphocytic, Acute, L1 In conclusion, the RFC1 G80A polymorphism does not seem to be a good marker of M... BeFree 24597986 Detail
0.132 Precursor Cell Lymphoblastic Leukemia Lymphoma We investigated preliminarily whether methylenetetrahydrofolate reductase (MTHFR... BeFree 18458567 Detail
<0.001 Colorectal cancer metastatic NA BeFree Detail
0.135 Down syndrome In conclusion, the presence of three or more polymorphic alleles for MTHFR C677T... BeFree 18273817 Detail
0.020 rheumatoid arthritis We investigated the contribution of common genetic polymorphisms in RFC-1 (G80A)... BeFree 15457444 Detail
<0.001 Lymphoma, Large-Cell, Follicular The polymorphisms examined and haplotypes generated included thymidylate synthas... BeFree 15198953 Detail
0.008 spina bifida Although this study did not find an increased spina bifida risk for infants who ... BeFree 11857541 Detail
0.006 Malignant neoplasm of breast Genetic polymorphisms of glutathione S-transferase (GST) genes including GSTT1 p... BeFree 17180579 Detail
<0.001 Homocysteinemia To the best of our knowledge, this is the first family with multiple AIS patient... BeFree 18958479 Detail
0.003 breast carcinoma Genetic polymorphisms of glutathione S-transferase (GST) genes including GSTT1 p... BeFree 17180579 Detail
0.003 Acute lymphocytic leukemia This study evaluated the effect of the G80A polymorphism in the RFC1 gene on sur... BeFree 22914600 Detail
<0.001 esophagitis In addition, there was a trend toward reduced hematological toxicity among patie... BeFree 25041994 Detail
0.132 Precursor Cell Lymphoblastic Leukemia Lymphoma Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C142... BeFree 22838948 Detail
0.003 breast carcinoma Conversely, for women over 50, the risk of breast cancer development was statist... BeFree 22134752 Detail
0.020 rheumatoid arthritis The aim of our study was to characterize the association of clinicopathological ... BeFree 24350725 Detail
<0.001 stomatitis In addition, there was a trend toward reduced hematological toxicity among patie... BeFree 25041994 Detail
0.132 Precursor Cell Lymphoblastic Leukemia Lymphoma This study evaluated the effect of the G80A polymorphism in the RFC1 gene on sur... BeFree 22914600 Detail
0.020 rheumatoid arthritis We investigated whether polymorphisms in reduced folate carrier (SLC19A1 G80A) a... BeFree 15564880 Detail
0.020 rheumatoid arthritis The results of this study suggest that the RFC1 G80A polymorphism may be a usefu... BeFree 22971639 Detail
<0.001 Squamous cell carcinoma of the head and neck NA BeFree Detail
0.005 Cerebrovascular accident Two siblings with a homozygous MTHFR C677T (G80A-RFC1) mutation and stroke. BeFree 18958479 Detail
<0.001 Precursor B-cell lymphoblastic leukemia NA BeFree Detail
<0.001 Adenoma of large intestine NA BeFree Detail
<0.001 childhood leukemia NA BeFree Detail
0.004 colorectal cancer In conclusion, this is the first study to simultaneously evaluate both DNA methy... BeFree,GAD 25697897 Detail
0.002 Venous thromboembolism NA GAD Detail
0.003 coronary artery disease NA BeFree,GAD Detail
0.132 Precursor Cell Lymphoblastic Leukemia Lymphoma Effects of a microRNA binding site polymorphism in SLC19A1 on methotrexate conce... BeFree,CTD_human,GAD,LHGDN 24927955 Detail
<0.001 Maternal Fever However, the interaction between the SLC19A1 gene variant and maternal fever exp... BeFree 24917213 Detail
<0.001 Ischemic Cerebrovascular Accident Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stro... BeFree 25659099 Detail
<0.001 Homocysteinemia NA BeFree Detail
<0.001 Juvenile arthritis NA BeFree Detail
<0.001 juvenile rheumatoid arthritis NA BeFree Detail
0.003 Abruptio Placentae NA LHGDN Detail
0.003 adenocarcinoma NA BeFree,GAD Detail
0.120 adenoma NA BeFree,CTD_human Detail
0.020 rheumatoid arthritis NA BeFree,GAD,LHGDN Detail
0.120 autistic disorder NA BeFree,CTD_human Detail
0.005 Malignant neoplasm of urinary bladder NA BeFree,GAD Detail
0.120 Bladder Neoplasm NA CTD_human Detail
0.006 Malignant neoplasm of breast A number of these SNPs, specifically in genes including MTR, MTRR, SHMT1, TYMS a... BeFree,GAD 25598430 Detail
0.002 Malignant tumor of colon NA GAD Detail
<0.001 Malignant neoplasm of larynx NA BeFree Detail
0.003 Non-small cell lung carcinoma NA BeFree,GAD Detail
Annotation

Annotations

DescrptionSourceLinks
NA DisGeNET Detail
NA DisGeNET Detail
We selected three known RFC-1 polymorphisms (-43C>T, 80A>G, 696T>C) and investigated their relations... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
In conclusion, this is the first study to simultaneously evaluate both DNA methylation and protein e... DisGeNET Detail
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Effects of a microRNA binding site polymorphism in SLC19A1 on methotrexate concentrations in Chinese... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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NA DisGeNET Detail
RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with risk of nephroblasto... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Our results suggest that individuals carriers of genotype AA for the SLC19A1 gene present risk for t... DisGeNET Detail
RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with risk of nephroblasto... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
We selected three known RFC-1 polymorphisms (-43C>T, 80A>G, 696T>C) and investigated their relations... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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NA DisGeNET Detail
NA DisGeNET Detail
A number of these SNPs, specifically in genes including MTR, MTRR, SHMT1, TYMS and SLC19A1, were ass... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Our results suggest that individuals carriers of genotype AA for the SLC19A1 gene present risk for t... DisGeNET Detail
RFC-1 80G>A polymorphism in case-mother/control-mother dyads is associated with risk of nephroblasto... DisGeNET Detail
NA DisGeNET Detail
Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stroke and silent brain ... DisGeNET Detail
NA DisGeNET Detail
RFC1 and non-syndromic cleft lip with or without cleft palate: an association based study in Italy. DisGeNET Detail
While donor single nucleotide polymorphisms of dihydrofolate reductase and solute carrier family 19 ... DisGeNET Detail
We investigated preliminarily whether methylenetetrahydrofolate reductase (MTHFR) 677C/T or reduced ... DisGeNET Detail
To the best of our knowledge, this is the first family with multiple AIS patients harboring homozygo... DisGeNET Detail
A case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed t... DisGeNET Detail
In view of growing body of evidence favouring the association of aberrations in one-carbon metabolis... DisGeNET Detail
Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R... DisGeNET Detail
Five SNPs in the SLC19A1 (RFC1) gene: rs1051266 (G80A), rs283895, rs2236484, rs12482346, and rs28389... DisGeNET Detail
Frequencies of MTHFR C677T and A1298C were similar to those reported in Japanese RA patients, while ... DisGeNET Detail
Compound mutants for (MTHFD-G1958A, MTHFR-C677T and MTR-A2756G) and (MTHFD-G1958A, RFC1-G80A and MTR... DisGeNET Detail
A80G polymorphism of reduced folate carrier 1 (RFC1) gene and head and neck squamous cell carcinoma ... DisGeNET Detail
Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stroke and silent brain ... DisGeNET Detail
The polymorphisms examined and haplotypes generated included thymidylate synthase (TYMS 28-bp triple... DisGeNET Detail
Subsequent log linear analysis of the RFC1 A80G genotype within family trios revealed that the mater... DisGeNET Detail
Conversely, for women over 50, the risk of breast cancer development was statistically associated wi... DisGeNET Detail
In conclusion, the RFC1 G80A polymorphism does not seem to be a good marker of MTX-related toxicity ... DisGeNET Detail
We investigated preliminarily whether methylenetetrahydrofolate reductase (MTHFR) 677C/T or reduced ... DisGeNET Detail
NA DisGeNET Detail
In conclusion, the presence of three or more polymorphic alleles for MTHFR C677T, MTHFR A1298C, MTR ... DisGeNET Detail
We investigated the contribution of common genetic polymorphisms in RFC-1 (G80A), ATIC (C347G), and ... DisGeNET Detail
The polymorphisms examined and haplotypes generated included thymidylate synthase (TYMS 28-bp triple... DisGeNET Detail
Although this study did not find an increased spina bifida risk for infants who were heterozygous or... DisGeNET Detail
Genetic polymorphisms of glutathione S-transferase (GST) genes including GSTT1 positive/null, GSTM1 ... DisGeNET Detail
To the best of our knowledge, this is the first family with multiple AIS patients harboring homozygo... DisGeNET Detail
Genetic polymorphisms of glutathione S-transferase (GST) genes including GSTT1 positive/null, GSTM1 ... DisGeNET Detail
This study evaluated the effect of the G80A polymorphism in the RFC1 gene on survival and risk of re... DisGeNET Detail
In addition, there was a trend toward reduced hematological toxicity among patients with variants of... DisGeNET Detail
Children with ALL (n = 96) were screened for GCPII C1561T, RFC1 G80A, cSHMT C1420T, TYMS 5´-UTR 2R3R... DisGeNET Detail
Conversely, for women over 50, the risk of breast cancer development was statistically associated wi... DisGeNET Detail
The aim of our study was to characterize the association of clinicopathological variables and the SL... DisGeNET Detail
In addition, there was a trend toward reduced hematological toxicity among patients with variants of... DisGeNET Detail
This study evaluated the effect of the G80A polymorphism in the RFC1 gene on survival and risk of re... DisGeNET Detail
We investigated whether polymorphisms in reduced folate carrier (SLC19A1 G80A) and gamma-glutamyl-hy... DisGeNET Detail
The results of this study suggest that the RFC1 G80A polymorphism may be a useful marker for predict... DisGeNET Detail
NA DisGeNET Detail
Two siblings with a homozygous MTHFR C677T (G80A-RFC1) mutation and stroke. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
In conclusion, this is the first study to simultaneously evaluate both DNA methylation and protein e... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Effects of a microRNA binding site polymorphism in SLC19A1 on methotrexate concentrations in Chinese... DisGeNET Detail
However, the interaction between the SLC19A1 gene variant and maternal fever exposure and NTD risk r... DisGeNET Detail
Association of reduced folate carrier-1 (RFC-1) polymorphisms with ischemic stroke and silent brain ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
A number of these SNPs, specifically in genes including MTR, MTRR, SHMT1, TYMS and SLC19A1, were ass... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs386514057 dbSNP
Genome
hg19
Position
chr21:46,918,115-46,983,029
Variant Type
snv
Genome browser