chr7:152341861:> Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr7:152,341,861-152,373,278 |
| hg38 | chr7:152,644,776-152,676,193 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.010 | squamous cell carcinoma | NA | GAD,LHGDN | Detail | |
| <0.001 | carcinosarcoma | NA | BeFree | Detail | |
| 0.002 | Chromosome Aberrations | NA | GAD | Detail | |
| 0.001 | colorectal carcinoma | XRCC2 gene polymorphisms and its protein are associated with colorectal cancer s... | BeFree | 25304007 | Detail |
| 0.001 | colorectal carcinoma | XRCC2 promotes colorectal cancer cell growth, regulates cell cycle progression, ... | BeFree | 25526472 | Detail |
| 0.002 | Colorectal Neoplasms | NA | GAD | Detail | |
| 0.007 | Esophageal Neoplasms | NA | GAD | Detail | |
| <0.001 | Fanconi anemia | NA | BeFree | Detail | |
| 0.005 | Glioma | NA | GAD | Detail | |
| 0.002 | Head and Neck Neoplasms | NA | GAD | Detail | |
| 0.002 | Laryngeal neoplasm | NA | GAD | Detail | |
| 0.002 | leukemia | NA | GAD | Detail | |
| 0.002 | chronic lymphocytic leukemia | NA | GAD | Detail | |
| 0.002 | Lymphoma, Follicular | NA | GAD | Detail | |
| 0.002 | Lymphoma, Non-Hodgkin | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of stomach | Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expre... | BeFree | 25418835 | Detail |
| <0.001 | Malignant neoplasm of stomach | Polymorphisms in DNA repair genes XRCC2 and XRCC3 risk of gastric cancer in Turk... | BeFree | 25428673 | Detail |
| 0.002 | melanoma | NA | GAD | Detail | |
| 0.002 | Meningeal Neoplasms | NA | GAD | Detail | |
| 0.002 | meningioma | NA | GAD | Detail | |
| 0.010 | Mouth Neoplasms | NA | GAD,LHGDN | Detail | |
| 0.002 | multiple sclerosis | NA | GAD | Detail | |
| <0.001 | Neoplasm Metastasis | Our data suggests that deregulation of XRCC2 in breast cancer has the potential ... | BeFree | 25159888 | Detail |
| 0.002 | acoustic neuroma | NA | GAD | Detail | |
| 0.002 | ovarian carcinoma | An association between the -41657 C/T polymorphism of X-ray repair cross-complem... | BeFree | 25355640 | Detail |
| 0.005 | Pancreatic Neoplasm | NA | GAD,LHGDN | Detail | |
| 0.002 | Pharyngeal Neoplasms | NA | GAD | Detail | |
| 0.002 | Precancerous Conditions | NA | GAD | Detail | |
| <0.001 | Rectal Neoplasms | NA | BeFree | Detail | |
| 0.005 | Stomach Neoplasms | NA | GAD | Detail | |
| 0.002 | Thyroid Neoplasm | NA | GAD | Detail | |
| <0.001 | Uterine Fibroids | NA | BeFree | Detail | |
| 0.002 | diffuse large B-cell lymphoma | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of pharynx | NA | BeFree | Detail | |
| <0.001 | pancreatic carcinoma | NA | BeFree | Detail | |
| 0.017 | Malignant neoplasm of lung | NA | GAD | Detail | |
| <0.001 | uterine carcinosarcoma | NA | BeFree | Detail | |
| <0.001 | Breast Cancer, Familial | NA | BeFree | Detail | |
| 0.003 | Malignant neoplasm of pancreas | NA | BeFree,GAD | Detail | |
| <0.001 | endometrial carcinoma | Association between -41657C/T single nucleotide polymorphism of DNA repair gene ... | BeFree | 26017882 | Detail |
| <0.001 | Carcinogenesis | NA | BeFree | Detail | |
| 0.003 | Epithelial ovarian cancer | XRCC2 polymorphisms may be associated with the development of certain types of c... | BeFree,GAD | 25355640 | Detail |
| <0.001 | Secondary malignant neoplasm of lymph node | Association of reduced XRCC2 expression with lymph node metastasis in breast can... | BeFree | 25159888 | Detail |
| <0.001 | stomach carcinoma | Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expre... | BeFree | 25418835 | Detail |
| <0.001 | stomach carcinoma | Polymorphisms in DNA repair genes XRCC2 and XRCC3 risk of gastric cancer in Turk... | BeFree | 25428673 | Detail |
| <0.001 | Carcinoma of bladder | NA | BeFree | Detail | |
| 0.005 | skin carcinoma | NA | GAD | Detail | |
| <0.001 | Pharyngeal Carcinoma | NA | BeFree | Detail | |
| 0.003 | ovarian neoplasm | NA | LHGDN | Detail | |
| 0.007 | Malignant neoplasm of ovary | An association between the -41657 C/T polymorphism of X-ray repair cross-complem... | BeFree,GAD | 25355640 | Detail |
| <0.001 | Squamous cell carcinoma of the head and neck | Combined effect of tobacco and DNA repair genes polymorphisms of XRCC1 and XRCC2... | BeFree | 24958516 | Detail |
| 0.002 | sarcoma | NA | GAD | Detail | |
| <0.001 | Sporadic Breast Carcinoma | NA | BeFree | Detail | |
| <0.001 | differentiated thyroid gland carcinoma | NA | BeFree | Detail | |
| 0.130 | Mammary Neoplasms | NA | CTD_human,GAD,LHGDN | Detail | |
| 0.006 | colorectal cancer | XRCC2 gene polymorphisms and its protein are associated with colorectal cancer s... | BeFree,GAD | 25304007 | Detail |
| 0.006 | colorectal cancer | XRCC2 promotes colorectal cancer cell growth, regulates cell cycle progression, ... | BeFree,GAD | 25526472 | Detail |
| <0.001 | Rectal Tumors | NA | BeFree | Detail | |
| <0.001 | Uterine Corpus Carcinosarcoma | NA | BeFree | Detail | |
| <0.001 | uterine corpus cancer | Association between -41657C/T single nucleotide polymorphism of DNA repair gene ... | BeFree | 26017882 | Detail |
| 0.001 | Non-small cell lung carcinoma | Our results indicate that SNPs in the NER genes ERCC1 (Asn118Asn, 15310G>C, 8... | BeFree | 16195237 | Detail |
| <0.001 | FANCONI ANEMIA, COMPLEMENTATION GROUP A (disorder) | NA | BeFree | Detail | |
| <0.001 | Triple Negative Breast Neoplasms | Association between single nucleotide polymorphisms (SNPs) of XRCC2 and XRCC3 ho... | BeFree | 24728564 | Detail |
| <0.001 | Experimental Organism Basal Cell Carcinoma | NA | BeFree | Detail | |
| 0.007 | adenocarcinoma | NA | GAD,LHGDN | Detail | |
| 0.012 | Malignant neoplasm of urinary bladder | NA | BeFree,GAD | Detail | |
| 0.005 | Brain Neoplasms | NA | GAD | Detail | |
| 0.002 | Breast Diseases | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of endometrium | Association between -41657C/T single nucleotide polymorphism of DNA repair gene ... | BeFree | 26017882 | Detail |
| <0.001 | Malignant neoplasm of skin | NA | BeFree | Detail | |
| 0.001 | Non-small cell lung carcinoma | Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expre... | BeFree | 25418835 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| XRCC2 gene polymorphisms and its protein are associated with colorectal cancer susceptibility in Chi... | DisGeNET | Detail |
| XRCC2 promotes colorectal cancer cell growth, regulates cell cycle progression, and apoptosis. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expressed in the majority... | DisGeNET | Detail |
| Polymorphisms in DNA repair genes XRCC2 and XRCC3 risk of gastric cancer in Turkey. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Our data suggests that deregulation of XRCC2 in breast cancer has the potential to predict lymph nod... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| An association between the -41657 C/T polymorphism of X-ray repair cross-complementing 2 (XRCC2) gen... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Association between -41657C/T single nucleotide polymorphism of DNA repair gene XRCC2 and endometria... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| XRCC2 polymorphisms may be associated with the development of certain types of cancers, but little i... | DisGeNET | Detail |
| Association of reduced XRCC2 expression with lymph node metastasis in breast cancer tissues. | DisGeNET | Detail |
| Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expressed in the majority... | DisGeNET | Detail |
| Polymorphisms in DNA repair genes XRCC2 and XRCC3 risk of gastric cancer in Turkey. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| An association between the -41657 C/T polymorphism of X-ray repair cross-complementing 2 (XRCC2) gen... | DisGeNET | Detail |
| Combined effect of tobacco and DNA repair genes polymorphisms of XRCC1 and XRCC2 influence high risk... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| XRCC2 gene polymorphisms and its protein are associated with colorectal cancer susceptibility in Chi... | DisGeNET | Detail |
| XRCC2 promotes colorectal cancer cell growth, regulates cell cycle progression, and apoptosis. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Association between -41657C/T single nucleotide polymorphism of DNA repair gene XRCC2 and endometria... | DisGeNET | Detail |
| Our results indicate that SNPs in the NER genes ERCC1 (Asn118Asn, 15310G>C, 8902G>T), XPA (-4G... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Association between single nucleotide polymorphisms (SNPs) of XRCC2 and XRCC3 homologous recombinati... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Association between -41657C/T single nucleotide polymorphism of DNA repair gene XRCC2 and endometria... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Immunohistochemical study showed that Rad54 and XRCC2 proteins were highly expressed in the majority... | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs386493716 dbSNP
- Genome
- hg19
- Position
- chr7:152,341,861-152,373,278
- Variant Type
- snv
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