chr17:2496906:> Detail (hg19)

Information

Genome

Assembly Position
hg19 chr17:2,496,906-2,588,909
hg38 chr17:2,593,612-2,685,615 

HGVS

Type Transcript Protein
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

[No Data.]

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.002 Cardiovascular Diseases NA GAD Detail
0.002 cerebral infarction NA GAD Detail
0.002 chorioamnionitis NA GAD Detail
0.008 Congenital chromosomal disease A 14-yr-old male was admitted to our hospital with MDS and the chromosomal abnor... BeFree 25130056 Detail
0.008 Congenital chromosomal disease Karyotype analysis was performed in 179 patients with AML or MDS with the differ... BeFree 26214902 Detail
<0.001 Cognition Disorders NA BeFree Detail
0.002 Connective Tissue Diseases NA GAD Detail
0.002 Coronary heart disease NA GAD Detail
<0.001 Presenile dementia NA BeFree Detail
<0.001 dystonia NA BeFree Detail
<0.001 Eosinophilia NA BeFree Detail
0.001 epilepsy NA BeFree Detail
<0.001 Failure to Thrive NA BeFree Detail
0.002 Fetal Diseases NA GAD Detail
0.002 Fetal Membranes, Premature Rupture NA GAD Detail
<0.001 Focal glomerulosclerosis NA BeFree Detail
<0.001 Graft-vs-Host Disease NA BeFree Detail
0.001 Hematological Disease NA BeFree Detail
<0.001 HIV Infections NA BeFree Detail
<0.001 Immune System Diseases NA BeFree Detail
0.005 Inflammation NA GAD Detail
0.002 Premature Obstetric Labor NA GAD Detail
0.005 leukemia RUNX1 translocations and amplifications have been implicated in acute myeloblast... BeFree 24912843 Detail
<0.001 chronic lymphocytic leukemia NA BeFree Detail
<0.001 Acute lymphocytic leukemia NA BeFree Detail
0.039 Leukemia, Myelocytic, Acute A recent report in Nature now demonstrates that a specific mutation in mouse col... BeFree 24589711 Detail
0.039 Leukemia, Myelocytic, Acute In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles de... BeFree 24845343 Detail
0.039 Leukemia, Myelocytic, Acute Although the frequency of evolution from hypocellular MDS to AML is low, our res... BeFree 25180186 Detail
0.039 Leukemia, Myelocytic, Acute TP53 was the most common mutated gene in t-MDS (35.7%) as well as t-AML (33.3%),... BeFree 25573287 Detail
0.039 Leukemia, Myelocytic, Acute What came first: MDS or AML? BeFree 25721039 Detail
0.039 Leukemia, Myelocytic, Acute This TP53 mutation pattern was strikingly similar to that observed in de novo MD... BeFree 25952993 Detail
0.039 Leukemia, Myelocytic, Acute Karyotype analysis was performed in 179 patients with AML or MDS with the differ... BeFree 26214902 Detail
0.001 myeloid leukemia NA BeFree Detail
0.001 Myeloid Leukemia, Chronic NA BeFree Detail
0.007 Leukemia, Myelomonocytic, Chronic The study group included 13 MPN and four MDS/MPN patients (seven polycythemia ve... BeFree 24845343 Detail
0.001 acute promyelocytic leukemia NA BeFree Detail
0.001 leukopenia NA BeFree Detail
<0.001 lymphedema Heterozygous germline mutations in the zinc finger transcription factor GATA2 ha... BeFree 26214525 Detail
0.001 lymphoma NA BeFree Detail
<0.001 medulloblastoma NA BeFree Detail
<0.001 melanoma NA BeFree Detail
<0.001 Mental Retardation NA BeFree Detail
<0.001 microcephaly NA BeFree Detail
0.004 Monosomy NA BeFree Detail
<0.001 Movement Disorders The Movement Disorder Society-Unified Parkinson's Disease Rating Scale (MDS-UPDR... BeFree 25487881 Detail
0.002 Mucocutaneous Lymph Node Syndrome NA GAD Detail
0.001 multiple myeloma NA BeFree Detail
0.002 Musculoskeletal Diseases NA GAD Detail
<0.001 myelofibrosis NA BeFree Detail
0.002 Myeloproliferative disease In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles de... BeFree 24845343 Detail
<0.001 Neoplasm Metastasis NA BeFree Detail
<0.001 nervous system disorder NA BeFree Detail
<0.001 Ovarian Diseases NA BeFree Detail
0.003 Periodontitis, Juvenile NA LHGDN Detail
<0.001 polycythemia vera The study group included 13 MPN and four MDS/MPN patients (seven polycythemia ve... BeFree 24845343 Detail
0.002 pre-eclampsia NA GAD Detail
0.002 Pregnancy Complications, Hematologic NA GAD Detail
0.011 Preleukemia The presence of somatic mutations in splicing factor 3b subunit 1 (SF3B1) in pat... BeFree 25481243 Detail
0.011 Preleukemia Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently... BeFree 25619630 Detail
0.011 Preleukemia Heterozygous germline mutations in the zinc finger transcription factor GATA2 ha... BeFree 26214525 Detail
<0.001 Psychotic Disorders NA BeFree Detail
0.006 schizophrenia NA BeFree,GAD Detail
0.002 Dermatologic disorders NA GAD Detail
0.001 West syndrome NA BeFree Detail
<0.001 Thrombocythemia, Essential The study group included 13 MPN and four MDS/MPN patients (seven polycythemia ve... BeFree 24845343 Detail
<0.001 Trisomy NA BeFree Detail
<0.001 Liver failure NA BeFree Detail
0.003 acute leukemia NA BeFree Detail
<0.001 Monocytosis NA BeFree Detail
0.009 Premature Birth NA GAD Detail
<0.001 Adenocarcinoma of lung (disorder) NA BeFree Detail
<0.001 cholangiocarcinoma Our results showed that miR-144 was reduced in CCA tissues and suggested that mi... BeFree 25479763 Detail
<0.001 Adult Acute Myeloblastic Leukemia NA BeFree Detail
<0.001 secondary myelofibrosis Among them, five patients (two PV, two MPN-U, and one MDS/MPN-U) progressed to M... BeFree 24845343 Detail
<0.001 Malignant neoplasm of lung NA BeFree Detail
0.209 Miller Dieker syndrome Fluorescence in situ hybridization using a commercially available LIS1 probe fai... BeFree,MGD,ORPHANET 23933666 Detail
0.002 Congenital anomaly of brain NA BeFree Detail
0.132 lissencephaly NA BeFree,CTD_human Detail
<0.001 cerebellar hypoplasia NA BeFree Detail
0.001 Pachygyria NA BeFree Detail
<0.001 Congenital anomaly of face NA BeFree Detail
<0.001 Renal glomerular disease NA BeFree Detail
<0.001 Acquired aplastic anemia NA BeFree Detail
<0.001 Philadelphia chromosome positive chronic myelogenous leukemia Few patients in remission of Ph-positive chronic myelogenous leukemia (CML) deve... BeFree 25631405 Detail
<0.001 Refractory anemia with excess blasts in transformation (clinical) NA BeFree Detail
<0.001 Solid tumour NA BeFree Detail
0.327 Classical Lissencephaly The authors suggest that the few patients found thus far with missense mutations... UNIPROT 11502906 Detail
0.327 Classical Lissencephaly Mosaic mutations of the LIS1 gene cause subcortical band heterotopia. UNIPROT 14581661 Detail
0.001 secondary acute myeloid leukemia NA BeFree Detail
<0.001 de novo myelodysplastic syndromes NA BeFree Detail
<0.001 anaplastic astrocytoma NA BeFree Detail
<0.001 Nonorganic psychosis NA BeFree Detail
0.001 juvenile myelomonocytic leukemia NA BeFree Detail
<0.001 prediabetes syndrome NA BeFree Detail
0.001 Hematologic Neoplasms NA BeFree Detail
<0.001 Dystonia Disorders NA BeFree Detail
<0.001 Developmental delay (disorder) NA BeFree Detail
0.327 Classical Lissencephaly NA BeFree,MGD,ORPHANET,UNIPROT Detail
0.002 Chromosome 8, trisomy The aim of our study was 1) to define if the amplification of c-MYC, MLL and RUN... BeFree 26214902 Detail
<0.001 dementia NA BeFree Detail
0.002 Severe asthma NA GAD Detail
<0.001 Severe depression NA BeFree Detail
0.121 Carcinogenesis NA BeFree,CTD_human Detail
0.002 Leukemogenesis NA BeFree Detail
<0.001 thrombocytosis The remaining cases usually lack the JAK2(V617F)mutation, have a platelet count ... BeFree 21350094 Detail
0.001 breast carcinoma The efficacy of the software is verified through MDS and clustering and tested w... BeFree 25905921 Detail
0.039 Leukemia, Myelocytic, Acute Among five patients diagnosed with MDS/MPN-U, three patients harboured RUNX1 (AM... BeFree 22571758 Detail
0.001 Myeloid Leukemia, Chronic Previous studies have reported FLT3 mutation in as many as 9.2% of myeloprolifer... BeFree 23846442 Detail
<0.001 Carcinoma of lung NA BeFree Detail
0.001 5q-syndrome NA BeFree Detail
<0.001 thrombocytosis NA BeFree Detail
<0.001 Leukemia secondary NA BeFree Detail
0.002 Cardiomyopathies NA GAD Detail
0.001 Leukemia, Myeloid, Chronic, Atypical, BCR-ABL Negative The study group included 13 MPN and four MDS/MPN patients (seven polycythemia ve... BeFree 24845343 Detail
0.001 Leukemia, Myeloid, Chronic, Atypical, BCR-ABL Negative According to the 2008 WHO classification, the category of myelodysplastic/myelop... BeFree 25212680 Detail
0.002 Chronic myeloproliferative disorder In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles de... BeFree 24845343 Detail
0.001 Myelodysplastic Syndrome with Isolated del(5q) NA BeFree Detail
0.001 Therapy-related myelodysplastic syndrome TP53 was the most common mutated gene in t-MDS (35.7%) as well as t-AML (33.3%),... BeFree 25573287 Detail
<0.001 Partial Trisomy NA BeFree Detail
0.004 Myelodysplastic-Myeloproliferative Diseases Myeloproliferative neoplasms (MPN) and myelodysplastic/myeloproliferative neopla... BeFree 24845343 Detail
0.004 Myelodysplastic-Myeloproliferative Diseases According to the 2008 WHO classification, the category of myelodysplastic/myelop... BeFree 25212680 Detail
<0.001 Eosinophilic disorder NA BeFree Detail
<0.001 Refractory anemia with excess blasts II NA BeFree Detail
<0.001 Acute Myeloid Leukemia Arising from Previous Myelodysplastic Syndrome NA BeFree Detail
0.001 Treatment related acute myeloid leukaemia NA BeFree Detail
<0.001 Autism Spectrum Disorders NA BeFree Detail
<0.001 Disorder characterized by eosinophilia NA BeFree Detail
<0.001 Milroy Disease Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently... BeFree 25619630 Detail
0.001 Chromosome 5, trisomy 5q NA BeFree Detail
<0.001 Malformations of Cortical Development, Group II NA BeFree Detail
<0.001 X-Linked Lissencephaly NA BeFree Detail
<0.001 campomelic dysplasia NA BeFree Detail
<0.001 periventricular nodular heterotopia NA BeFree Detail
<0.001 Agyria NA BeFree Detail
0.122 Classical Lissencephalies and Subcortical Band Heterotopias NA CTD_human,GAD Detail
<0.001 Precursor Cell Lymphoblastic Leukemia Lymphoma NA BeFree Detail
<0.001 Refractory anemia with ring sideroblasts associated with marked thrombocytosis NA BeFree Detail
0.002 Infection of amniotic sac and membranes, unspecified, unspecified trimester, not applicable or unspecified NA GAD Detail
<0.001 Double cortex NA BeFree Detail
<0.001 myeloid neoplasm Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently... BeFree 25619630 Detail
0.001 Refractory anemia, without ringed sideroblasts, without excess blasts NA BeFree Detail
<0.001 Emberger syndrome Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently... BeFree 25619630 Detail
0.009 myelodysplastic syndrome The presence of somatic mutations in splicing factor 3b subunit 1 (SF3B1) in pat... BeFree 25481243 Detail
0.009 myelodysplastic syndrome Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently... BeFree 25619630 Detail
0.009 myelodysplastic syndrome Heterozygous germline mutations in the zinc finger transcription factor GATA2 ha... BeFree 26214525 Detail
0.002 Infection NA GAD Detail
0.120 CHROMOSOME 17p13.3, CENTROMERIC, DUPLICATION SYNDROME NA ORPHANET Detail
0.003 Congenital Abnormality NA BeFree Detail
0.001 Primary myelofibrosis NA BeFree Detail
0.002 Alzheimer's disease NA GAD Detail
0.002 anemia NA BeFree Detail
0.001 aplastic anemia NA BeFree Detail
0.001 Refractory anemias NA BeFree Detail
0.004 Refractory anaemia with excess blasts NA BeFree Detail
0.007 asthma NA GAD,LHGDN Detail
0.002 atherosclerosis NA GAD Detail
<0.001 autistic disorder NA BeFree Detail
<0.001 Blast Phase NA BeFree Detail
0.001 Malignant neoplasm of breast The efficacy of the software is verified through MDS and clustering and tested w... BeFree 25905921 Detail
<0.001 Non-small cell lung carcinoma NA BeFree Detail
Annotation

Annotations

DescrptionSourceLinks
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
A 14-yr-old male was admitted to our hospital with MDS and the chromosomal abnormality 45,XY,der(5;1... DisGeNET Detail
Karyotype analysis was performed in 179 patients with AML or MDS with the different chromosomal aber... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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RUNX1 translocations and amplifications have been implicated in acute myeloblastic leukemia, acute l... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
A recent report in Nature now demonstrates that a specific mutation in mouse collagen-expressing ost... DisGeNET Detail
In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles decreased according to... DisGeNET Detail
Although the frequency of evolution from hypocellular MDS to AML is low, our results suggest that so... DisGeNET Detail
TP53 was the most common mutated gene in t-MDS (35.7%) as well as t-AML (33.3%), significantly highe... DisGeNET Detail
What came first: MDS or AML? DisGeNET Detail
This TP53 mutation pattern was strikingly similar to that observed in de novo MDS/AML. DisGeNET Detail
Karyotype analysis was performed in 179 patients with AML or MDS with the different chromosomal aber... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The study group included 13 MPN and four MDS/MPN patients (seven polycythemia vera (PV); four essent... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Heterozygous germline mutations in the zinc finger transcription factor GATA2 have recently been sho... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The Movement Disorder Society-Unified Parkinson's Disease Rating Scale (MDS-UPDRS), the Hoehn and Ya... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles decreased according to... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The study group included 13 MPN and four MDS/MPN patients (seven polycythemia vera (PV); four essent... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The presence of somatic mutations in splicing factor 3b subunit 1 (SF3B1) in patients with Myelodysp... DisGeNET Detail
Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently described MonoMAC s... DisGeNET Detail
Heterozygous germline mutations in the zinc finger transcription factor GATA2 have recently been sho... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The study group included 13 MPN and four MDS/MPN patients (seven polycythemia vera (PV); four essent... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Our results showed that miR-144 was reduced in CCA tissues and suggested that miR-144 may be an esse... DisGeNET Detail
NA DisGeNET Detail
Among them, five patients (two PV, two MPN-U, and one MDS/MPN-U) progressed to MF and three patients... DisGeNET Detail
NA DisGeNET Detail
Fluorescence in situ hybridization using a commercially available LIS1 probe failed to detect a dele... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Few patients in remission of Ph-positive chronic myelogenous leukemia (CML) develop Ph-negative MDS/... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The authors suggest that the few patients found thus far with missense mutations of LIS1 results fro... DisGeNET Detail
Mosaic mutations of the LIS1 gene cause subcortical band heterotopia. DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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The aim of our study was 1) to define if the amplification of c-MYC, MLL and RUNX1 genes is related ... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The remaining cases usually lack the JAK2(V617F)mutation, have a platelet count less than 600 × 10(3... DisGeNET Detail
The efficacy of the software is verified through MDS and clustering and tested with available 11 fam... DisGeNET Detail
Among five patients diagnosed with MDS/MPN-U, three patients harboured RUNX1 (AML1) mutations; one c... DisGeNET Detail
Previous studies have reported FLT3 mutation in as many as 9.2% of myeloproliferative neoplasms (MPN... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The study group included 13 MPN and four MDS/MPN patients (seven polycythemia vera (PV); four essent... DisGeNET Detail
According to the 2008 WHO classification, the category of myelodysplastic/myeloproliferative neoplas... DisGeNET Detail
In one patient (MDS/MPN-U) evolving to AML, the number of JAK2 mutant alleles decreased according to... DisGeNET Detail
NA DisGeNET Detail
TP53 was the most common mutated gene in t-MDS (35.7%) as well as t-AML (33.3%), significantly highe... DisGeNET Detail
NA DisGeNET Detail
Myeloproliferative neoplasms (MPN) and myelodysplastic/myeloproliferative neoplasms (MDS/MPN) may tr... DisGeNET Detail
According to the 2008 WHO classification, the category of myelodysplastic/myeloproliferative neoplas... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently described MonoMAC s... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently described MonoMAC s... DisGeNET Detail
NA DisGeNET Detail
Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently described MonoMAC s... DisGeNET Detail
The presence of somatic mutations in splicing factor 3b subunit 1 (SF3B1) in patients with Myelodysp... DisGeNET Detail
Guanine-adenine-thymine-adenine 2 (GATA2) mutated disorders include the recently described MonoMAC s... DisGeNET Detail
Heterozygous germline mutations in the zinc finger transcription factor GATA2 have recently been sho... DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
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NA DisGeNET Detail
NA DisGeNET Detail
NA DisGeNET Detail
The efficacy of the software is verified through MDS and clustering and tested with available 11 fam... DisGeNET Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs28936410 dbSNP
Genome
hg19
Position
chr17:2,496,906-2,588,909
Variant Type
snv
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