chr12:93569814:> Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr12:93,963,590-93,970,521 |
| hg38 | chr12:93,569,814-93,576,745 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | squamous cell carcinoma | NA | BeFree | Detail | |
| <0.001 | colorectal carcinoma | NA | BeFree | Detail | |
| <0.001 | cystic fibrosis | NA | BeFree | Detail | |
| 0.003 | Diabetes Mellitus, Non-Insulin-Dependent | NA | BeFree,GAD | Detail | |
| <0.001 | gastritis | NA | BeFree | Detail | |
| <0.001 | leukemia | It remains untested whether high SOCS2 expression identifies a subset of leukemi... | BeFree | 24559289 | Detail |
| <0.001 | leukemia | Accordingly, a comparison of murine wt and Socs2(-/-) HSC gene expression in res... | BeFree | 25858143 | Detail |
| <0.001 | lymphoid leukemia | High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymph... | BeFree | 25858143 | Detail |
| <0.001 | Acute lymphocytic leukemia | High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymph... | BeFree | 25858143 | Detail |
| <0.001 | Leukemia, Myelocytic, Acute | Given this aberrant signaling, we hypothesized that expression of suppressor of ... | BeFree | 24559289 | Detail |
| 0.003 | Myeloid Leukemia, Chronic | NA | BeFree,LHGDN | Detail | |
| <0.001 | Lupus Erythematosus, Systemic | NA | BeFree | Detail | |
| <0.001 | Lymphoma, Follicular | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of stomach | MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related ga... | BeFree | 25561270 | Detail |
| <0.001 | melanoma | NA | BeFree | Detail | |
| 0.003 | Myeloproliferative disease | NA | BeFree,LHGDN | Detail | |
| 0.120 | narcolepsy | NA | CTD_human | Detail | |
| <0.001 | Neoplasm Metastasis | NA | BeFree | Detail | |
| <0.001 | ovarian carcinoma | NA | BeFree | Detail | |
| <0.001 | plasmacytoma | NA | BeFree | Detail | |
| 0.003 | polycythemia vera | NA | LHGDN | Detail | |
| <0.001 | polyps | NA | BeFree | Detail | |
| <0.001 | Prostatic Neoplasms | NA | BeFree | Detail | |
| 0.002 | Respiratory Syncytial Virus Infections | NA | GAD | Detail | |
| <0.001 | Thrombocythemia, Essential | NA | BeFree | Detail | |
| <0.001 | Turner syndrome | NA | BeFree | Detail | |
| <0.001 | Vascular Diseases | NA | BeFree | Detail | |
| <0.001 | acute leukemia | SOCS2 Controls Proliferation and Stemness of Hematopoietic Cells under Stress Co... | BeFree | 25858143 | Detail |
| <0.001 | Secondary malignant neoplasm of bone | NA | BeFree | Detail | |
| 0.120 | Dermatitis, Allergic Contact | NA | CTD_human | Detail | |
| <0.001 | pediatric acute myeloblastic leukemia | High expression of suppressor of cytokine signaling-2 predicts poor outcome in p... | BeFree | 24559289 | Detail |
| 0.080 | Sepsis | NA | RGD | Detail | |
| <0.001 | Hyperplastic Polyp | NA | BeFree | Detail | |
| <0.001 | Night blindness, congenital stationary | NA | BeFree | Detail | |
| <0.001 | Helicobacter pylori (H. pylori) infection in conditions classified elsewhere and of unspecified site | MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related ga... | BeFree | 25561270 | Detail |
| <0.001 | Malignant neoplasm of prostate | NA | BeFree | Detail | |
| <0.001 | endometrial carcinoma | NA | BeFree | Detail | |
| <0.001 | Carcinogenesis | MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related ga... | BeFree | 25561270 | Detail |
| <0.001 | prostate carcinoma | NA | BeFree | Detail | |
| <0.001 | Chronic myeloproliferative disorder | In an MPD with t(9;12)(q13 approximately q21;q22) and JAK2 V617F mutation, array... | BeFree | 17574970 | Detail |
| 0.001 | breast carcinoma | SOCS2 (one of three SNPs) and all STAT3, STAT5A, and STAT5B SNPs significantly i... | BeFree | 25104439 | Detail |
| <0.001 | stomach carcinoma | MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related ga... | BeFree | 25561270 | Detail |
| <0.001 | Malignant neoplasm of ovary | NA | BeFree | Detail | |
| <0.001 | Chronic myeloproliferative disorder | NA | BeFree | Detail | |
| 0.003 | Mammary Neoplasms | NA | LHGDN | Detail | |
| <0.001 | colorectal cancer | NA | BeFree | Detail | |
| <0.001 | uterine corpus cancer | NA | BeFree | Detail | |
| <0.001 | Precursor Cell Lymphoblastic Leukemia Lymphoma | High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymph... | BeFree | 25858143 | Detail |
| <0.001 | liver carcinoma | Hypermethylation of SOCS2-7 and CISH genes was seldom found in HCC. | BeFree | 23941364 | Detail |
| <0.001 | Diminished ovarian reserve | NA | BeFree | Detail | |
| <0.001 | acromegaly | NA | BeFree | Detail | |
| <0.001 | rheumatoid arthritis | NA | BeFree | Detail | |
| 0.002 | asthma | NA | GAD | Detail | |
| 0.001 | Malignant neoplasm of breast | SOCS2 (one of three SNPs) and all STAT3, STAT5A, and STAT5B SNPs significantly i... | BeFree | 25104439 | Detail |
| 0.002 | Bronchiolitis, Viral | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of endometrium | NA | BeFree | Detail | |
| <0.001 | Adenocarcinoma of prostate | NA | BeFree | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| It remains untested whether high SOCS2 expression identifies a subset of leukemias with deregulated ... | DisGeNET | Detail |
| Accordingly, a comparison of murine wt and Socs2(-/-) HSC gene expression in response to 5-FU reveal... | DisGeNET | Detail |
| High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymphoblastic leukemias, ... | DisGeNET | Detail |
| High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymphoblastic leukemias, ... | DisGeNET | Detail |
| Given this aberrant signaling, we hypothesized that expression of suppressor of cytokine signaling-2... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related gastric cancer by repr... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| SOCS2 Controls Proliferation and Stemness of Hematopoietic Cells under Stress Conditions and Its Der... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| High expression of suppressor of cytokine signaling-2 predicts poor outcome in pediatric acute myelo... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related gastric cancer by repr... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related gastric cancer by repr... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| In an MPD with t(9;12)(q13 approximately q21;q22) and JAK2 V617F mutation, array comparative genomic... | DisGeNET | Detail |
| SOCS2 (one of three SNPs) and all STAT3, STAT5A, and STAT5B SNPs significantly interacted with use o... | DisGeNET | Detail |
| MiR-101 inhibits cell growth and tumorigenesis of Helicobacter pylori related gastric cancer by repr... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| High levels of SOCS2 characterize unfavorable subsets of acute myeloid and lymphoblastic leukemias, ... | DisGeNET | Detail |
| Hypermethylation of SOCS2-7 and CISH genes was seldom found in HCC. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| SOCS2 (one of three SNPs) and all STAT3, STAT5A, and STAT5B SNPs significantly interacted with use o... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs386626619 dbSNP
- Genome
- hg38
- Position
- chr12:93,569,814-93,576,745
- Variant Type
- snv
Genome browser