SSH2 slingshot protein phosphatase 2

Information
Symbol
SSH2
Type
protein-coding
Description
slingshot protein phosphatase 2
Entrez Gene ID
85464
Genome
hg19
Position
chr17:27,952,956-28,257,246
Genome
hg38
Position
chr17:29,625,938-29,930,228
MIM
606779 OMIM
HGNC
HGNC:30580 HGNC
Ensembl
ENSG00000141298 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 8
Likely benign 0 4
Uncertain significance 0 124
Ranking
ClinVar
0
0
0
136
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM SSH-2
SYNONYM SSH-2L
MIM 606779 OMIM
HGNC HGNC:30580 HGNC
Ensembl ENSG00000141298 Ensembl
AllianceGenome HGNC:30580
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000582084.1 hg38 chr17 29,925,217 29,930,276 5,060
ENST00000269033.7 hg38 chr17 29,625,938 29,930,152 304,215
ENST00000590153.1 hg38 chr17 29,925,277 29,930,228 4,952
ENST00000324677.12 hg38 chr17 29,673,840 29,761,390 87,551
ENST00000579954.1 hg38 chr17 29,928,282 29,930,062 1,781
ENST00000540801.6 hg38 chr17 29,625,938 29,930,228 304,291
ENST00000649863.1 hg38 chr17 29,630,800 29,761,417 130,618
ENST00000269033.7 hg19 chr17 27,952,956 28,257,170 304,215
ENST00000540801.6 hg19 chr17 27,952,956 28,257,246 304,291
ENST00000649863.1 hg19 chr17 27,957,818 28,088,435 130,618
ENST00000324677.12 hg19 chr17 28,000,858 28,088,408 87,551
ENST00000582084.1 hg19 chr17 28,252,235 28,257,294 5,060
ENST00000590153.1 hg19 chr17 28,252,295 28,257,246 4,952
ENST00000579954.1 hg19 chr17 28,255,300 28,257,080 1,781
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