ENST00000579954.1 SSH2

Information
Transcript ID
ENST00000579954.1
Genome
hg38
Position
chr17:29,928,282-29,930,062
Strand
-
CDS length
129
Amino acid length
43
Gene symbol
SSH2
Gene type
protein-coding
Gene description
slingshot protein phosphatase 2
Gene Entrez Gene ID
85464
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
2 29,928,282 29,928,584
1 29,929,938 29,930,062
CDS
Exon number Type Start Stop
2 CDS 29,928,519 29,928,584
1 CDS 29,929,938 29,930,000
Other genome
Genome Chromosome Start End Links
hg19 chr17 28,255,300 28,257,080 Link
CDS sequence
ATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACCACCTCCAGCCCCTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAA
Amino sequence
MALVTVQRSPTPSTTSSPCASRAELGFLVQGGRFPVIVRKNL*