ENST00000579954.1 SSH2

Information
Transcript ID
ENST00000579954.1
Genome
hg19
Position
chr17:28,255,300-28,257,080
Strand
-
CDS length
129
Amino acid length
43
Gene symbol
SSH2
Gene type
protein-coding
Gene description
slingshot protein phosphatase 2
Gene Entrez Gene ID
85464
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
2 28,255,300 28,255,602
1 28,256,956 28,257,080
CDS
Exon number Type Start Stop
2 CDS 28,255,537 28,255,602
1 CDS 28,256,956 28,257,018
Other genome
Genome Chromosome Start End Links
hg38 chr17 29,928,282 29,930,062 Link
CDS sequence
ATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACCACCTCCAGCCCCTGCGCCTCGAGAGCAGAACTGGGATTCTTGGTTCAGGGAGGCAGATTTCCAGTGATTGTAAGGAAGAATTTGTAA
Amino sequence
MALVTVQRSPTPSTTSSPCASRAELGFLVQGGRFPVIVRKNL*