ENST00000590153.1 SSH2

Information
Transcript ID
ENST00000590153.1
Genome
hg38
Position
chr17:29,925,277-29,930,228
Strand
-
CDS length
147
Amino acid length
49
Gene symbol
SSH2
Gene type
protein-coding
Gene description
slingshot protein phosphatase 2
Gene Entrez Gene ID
85464
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
2 29,925,277 29,925,555
1 29,929,938 29,930,228
CDS
Exon number Type Start Stop
2 CDS 29,925,472 29,925,555
1 CDS 29,929,938 29,930,000
Other genome
Genome Chromosome Start End Links
hg19 chr17 28,252,295 28,257,246 Link
CDS sequence
ATGGCTTTGGTCACGGTCCAGCGGTCACCTACCCCCAGCACCACCTCCAGCCCCTGCGCCTCGAGATGGGGACTTGCTTGGGGTCTTGCTGCCCAGGCTGGTCTTGAACTCGTGGCGTCAAGGGATCCTCCTGTCTCAGCCTCCTAA
Amino sequence
MALVTVQRSPTPSTTSSPCASRWGLAWGLAAQAGLELVASRDPPVSAS*