SUPT4H1 SPT4 homolog, DSIF elongation factor subunit
Information
- Symbol
- SUPT4H1
- Type
- protein-coding
- Description
- SPT4 homolog, DSIF elongation factor subunit
- Entrez Gene ID
- 6827
- Genome
- hg19
- Position
- chr17:56,422,539-56,429,562
- Genome
- hg38
- Position
- chr17:58,345,178-58,352,201
- MIM
- 603555 OMIM
- HGNC
- HGNC:11467 HGNC
- Ensembl
- ENSG00000213246 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 8 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
8 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | SPT4 |
| SYNONYM | SPT4H |
| SYNONYM | SUPT4H |
| SYNONYM | Supt4a |
| MIM | 603555 OMIM |
| HGNC | HGNC:11467 HGNC |
| Ensembl | ENSG00000213246 Ensembl |
| AllianceGenome | HGNC:11467 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000580947.1 | hg38 | chr17 | 58,346,212 | 58,353,093 | 6,882 |
| ENST00000581540.5 | hg38 | chr17 | 58,346,016 | 58,351,661 | 5,646 |
| ENST00000225504.8 | hg38 | chr17 | 58,345,178 | 58,352,201 | 7,024 |
| ENST00000577396.5 | hg38 | chr17 | 58,345,247 | 58,352,423 | 7,177 |
| ENST00000225504.8 | hg19 | chr17 | 56,422,539 | 56,429,562 | 7,024 |
| ENST00000577396.5 | hg19 | chr17 | 56,422,608 | 56,429,784 | 7,177 |
| ENST00000581540.5 | hg19 | chr17 | 56,423,377 | 56,429,022 | 5,646 |
| ENST00000580947.1 | hg19 | chr17 | 56,423,573 | 56,430,454 | 6,882 |
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