ENST00000581540.5 SUPT4H1

Information
Transcript ID
ENST00000581540.5
Genome
hg38
Position
chr17:58,346,016-58,351,661
Strand
-
CDS length
327
Amino acid length
109
Gene symbol
SUPT4H1
Gene type
protein-coding
Gene description
SPT4 homolog, DSIF elongation factor subunit
Gene Entrez Gene ID
6827
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 58,346,016 58,346,313
3 58,347,188 58,347,241
2 58,347,529 58,347,584
1 58,351,402 58,351,661
CDS
Exon number Type Start Stop
4 CDS 58,346,246 58,346,313
3 CDS 58,347,188 58,347,241
2 CDS 58,347,529 58,347,584
1 CDS 58,351,402 58,351,550
Other genome
Genome Chromosome Start End Links
hg19 chr17 56,423,377 56,429,022 Link
CDS sequence
ATGCTTATCTCTCCTTTTCCTTTATTTTTCTTTCACTCCCAGACTATAGACCAGTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACTAGCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCTATAAAGACCTAG
Amino sequence
MLISPFPLFFFHSQTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT*