ENST00000580947.1 SUPT4H1

Information
Transcript ID
ENST00000580947.1
Genome
hg38
Position
chr17:58,346,212-58,353,093
Strand
-
CDS length
354
Amino acid length
118
Gene symbol
SUPT4H1
Gene type
protein-coding
Gene description
SPT4 homolog, DSIF elongation factor subunit
Gene Entrez Gene ID
6827
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 58,346,212 58,346,313
5 58,347,188 58,347,241
4 58,347,529 58,347,584
3 58,351,402 58,351,508
2 58,352,067 58,352,178
1 58,352,951 58,353,093
CDS
Exon number Type Start Stop
6 CDS 58,346,246 58,346,313
5 CDS 58,347,188 58,347,241
4 CDS 58,347,529 58,347,584
3 CDS 58,351,402 58,351,508
2 CDS 58,352,067 58,352,135
Other genome
Genome Chromosome Start End Links
hg19 chr17 56,423,573 56,430,454 Link
CDS sequence
ATGGCCCTGGAGACGGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCAGTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACTAGCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCTATAAAGACCTAG
Amino sequence
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT*