ENST00000577396.5 SUPT4H1

Information
Transcript ID
ENST00000577396.5
Genome
hg19
Position
chr17:56,422,608-56,429,784
Strand
-
CDS length
231
Amino acid length
77
Gene symbol
SUPT4H1
Gene type
protein-coding
Gene description
SPT4 homolog, DSIF elongation factor subunit
Gene Entrez Gene ID
6827
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 56,422,608 56,423,674
4 56,424,549 56,424,602
3 56,424,890 56,424,945
2 56,428,763 56,428,869
1 56,429,426 56,429,784
CDS
Exon number Type Start Stop
5 CDS 56,423,607 56,423,674
4 CDS 56,424,549 56,424,602
3 CDS 56,424,890 56,424,945
2 CDS 56,428,763 56,428,815
Other genome
Genome Chromosome Start End Links
hg38 chr17 58,345,247 58,352,423 Link
CDS sequence
ATGAAGGGTAACCGAGAGATGGTATATGACTGCACTAGCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCTATAAAGACCTAG
Amino sequence
MKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT*