ENST00000577396.5 SUPT4H1

Information
Transcript ID
ENST00000577396.5
Genome
hg38
Position
chr17:58,345,247-58,352,423
Strand
-
CDS length
231
Amino acid length
77
Gene symbol
SUPT4H1
Gene type
protein-coding
Gene description
SPT4 homolog, DSIF elongation factor subunit
Gene Entrez Gene ID
6827
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 58,345,247 58,346,313
4 58,347,188 58,347,241
3 58,347,529 58,347,584
2 58,351,402 58,351,508
1 58,352,065 58,352,423
CDS
Exon number Type Start Stop
5 CDS 58,346,246 58,346,313
4 CDS 58,347,188 58,347,241
3 CDS 58,347,529 58,347,584
2 CDS 58,351,402 58,351,454
Other genome
Genome Chromosome Start End Links
hg19 chr17 56,422,608 56,429,784 Link
CDS sequence
ATGAAGGGTAACCGAGAGATGGTATATGACTGCACTAGCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGCCTACAAATCCAGAGACACAGCTATAAAGACCTAG
Amino sequence
MKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT*