chr4:187447946:> Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr4:187,447,946-187,476,721 |
| hg38 | chr4:186,526,792-186,555,567 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | squamous cell carcinoma | NA | BeFree | Detail | |
| 0.120 | Child Development Disorders, Pervasive | NA | CTD_human | Detail | |
| <0.001 | Colonic Neoplasms | NA | BeFree | Detail | |
| 0.080 | Diabetes Mellitus, Non-Insulin-Dependent | NA | BeFree,RGD | Detail | |
| <0.001 | Atrial Septal Defects | NA | BeFree | Detail | |
| <0.001 | Creutzfeldt-Jakob disease | NA | BeFree | Detail | |
| <0.001 | Neoplasm Metastasis | These results support gene-environment interactions of MTNR1A polymorphisms with... | BeFree | 25806809 | Detail |
| 0.003 | osteosarcoma | NA | LHGDN | Detail | |
| 0.120 | Retinal Diseases | NA | CTD_human | Detail | |
| <0.001 | schizophrenia | NA | BeFree | Detail | |
| 0.005 | Scoliosis, unspecified | NA | GAD,LHGDN | Detail | |
| <0.001 | lingual-facial-buccal dyskinesia | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of mouth | Interactions between environmental factors and melatonin receptor type 1A polymo... | BeFree | 25806809 | Detail |
| <0.001 | Lip and oral cavity carcinoma | Interactions between environmental factors and melatonin receptor type 1A polymo... | BeFree | 25806809 | Detail |
| <0.001 | Malignant neoplasm of lung | We found five polymorphisms in the MT-1 gene region that showed statistically si... | BeFree | 25174824 | Detail |
| 0.001 | Glaucoma, Primary Open Angle | NA | BeFree | Detail | |
| <0.001 | Adolescent idiopathic scoliosis | NA | BeFree | Detail | |
| <0.001 | Carcinogenesis | NA | BeFree | Detail | |
| 0.002 | breast carcinoma | NA | BeFree | Detail | |
| <0.001 | Carcinoma of lung | We found five polymorphisms in the MT-1 gene region that showed statistically si... | BeFree | 25174824 | Detail |
| <0.001 | Tardive Dyskinesia | NA | BeFree | Detail | |
| 0.002 | breast carcinoma | In women with three consecutive night shifts, a reduced risk of breast cancer wa... | BeFree | 23822714 | Detail |
| <0.001 | Hypersomnia | NA | BeFree | Detail | |
| <0.001 | Sleeplessness | NA | BeFree | Detail | |
| <0.001 | attention deficit hyperactivity disorder | NA | BeFree | Detail | |
| 0.002 | Malignant neoplasm of breast | In women with three consecutive night shifts, a reduced risk of breast cancer wa... | BeFree | 23822714 | Detail |
| 0.003 | Mammary Neoplasms | NA | BeFree,LHGDN | Detail | |
| <0.001 | Autism Spectrum Disorders | NA | BeFree | Detail | |
| <0.001 | AMYOTROPHIC LATERAL SCLEROSIS 1 | NA | BeFree | Detail | |
| <0.001 | liver carcinoma | NA | BeFree | Detail | |
| <0.001 | Lymphoma, Diffuse | NA | BeFree | Detail | |
| 0.003 | Alzheimer's disease | NA | LHGDN | Detail | |
| 0.002 | rheumatoid arthritis | NA | GAD | Detail | |
| 0.002 | autistic disorder | NA | GAD | Detail | |
| 0.002 | Malignant neoplasm of breast | NA | BeFree | Detail | |
| <0.001 | Non-small cell lung carcinoma | NA | BeFree | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| These results support gene-environment interactions of MTNR1A polymorphisms with smoking and betel q... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Interactions between environmental factors and melatonin receptor type 1A polymorphism in relation t... | DisGeNET | Detail |
| Interactions between environmental factors and melatonin receptor type 1A polymorphism in relation t... | DisGeNET | Detail |
| We found five polymorphisms in the MT-1 gene region that showed statistically significant associatio... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| We found five polymorphisms in the MT-1 gene region that showed statistically significant associatio... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs131113549 dbSNP
- Genome
- hg19
- Position
- chr4:187,447,946-187,476,721
- Variant Type
- snv
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