chr16:52470329:> Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr16:52,470,329-52,581,714 |
| hg38 | chr16:52,436,417-52,547,802 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.002 | Animal Mammary Neoplasms | NA | GAD | Detail | |
| <0.001 | Neoplasm Metastasis | In addition, these results can begin to shed light on the reported association o... | BeFree | 25632947 | Detail |
| <0.001 | ovarian carcinoma | NA | BeFree | Detail | |
| <0.001 | polycystic ovary syndrome | Mutational analysis of TOX3 in Chinese Han women with polycystic ovary syndrome. | BeFree | 25311971 | Detail |
| 0.002 | restless legs syndrome | NA | GAD | Detail | |
| 0.002 | Tobacco use disorder | NA | GAD | Detail | |
| <0.001 | Secondary malignant neoplasm of bone | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of female breast | NA | BeFree | Detail | |
| <0.001 | Carcinoma of male breast | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of male breast | NA | BeFree | Detail | |
| 0.120 | Breast Neoplasms, Male | NA | CTD_human | Detail | |
| <0.001 | Breast Cancer, Familial | NA | BeFree | Detail | |
| <0.001 | Carcinogenesis | NA | BeFree | Detail | |
| <0.001 | peri-menopausal | NA | BeFree | Detail | |
| 0.003 | Malignant neoplasm of ovary | NA | BeFree,GAD | Detail | |
| 0.123 | Mammary Neoplasms | A subset of breast tumors also highly expresses TOX3, with poor outcome associat... | BeFree,CTD_human,GAD | 25632947 | Detail |
| <0.001 | Mammographic Density | NA | BeFree | Detail | |
| <0.001 | Triple Negative Breast Neoplasms | NA | BeFree | Detail | |
| 0.010 | breast carcinoma | In the validation study using Stage I of the 2,273 cases and 2,052 controls, sev... | BeFree | 22452962 | Detail |
| 0.170 | Malignant neoplasm of breast | In the validation study using Stage I of the 2,273 cases and 2,052 controls, sev... | BeFree | 22452962 | Detail |
| 0.002 | amyotrophic lateral sclerosis | NA | GAD | Detail | |
| 0.002 | bipolar disorder | NA | GAD | Detail | |
| <0.001 | female breast carcinoma | NA | BeFree | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| In addition, these results can begin to shed light on the reported association of TOX3 expression an... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Mutational analysis of TOX3 in Chinese Han women with polycystic ovary syndrome. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| A subset of breast tumors also highly expresses TOX3, with poor outcome associated with high express... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| In the validation study using Stage I of the 2,273 cases and 2,052 controls, seven GWAS-identified l... | DisGeNET | Detail |
| In the validation study using Stage I of the 2,273 cases and 2,052 controls, seven GWAS-identified l... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs3734802 dbSNP
- Genome
- hg19
- Position
- chr16:52,470,329-52,581,714
- Variant Type
- snv
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