chr6:31542963:G>A Detail (hg19) (TNF)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:31,542,963-31,542,963 |
| hg38 | chr6:31,575,186-31,575,186 View the variant detail on this assembly version. |
HGVS
[No Data.]
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
| Clinical significance | Last evaluated | Review status | Condition | Origin | Links |
|---|---|---|---|---|---|
risk factor
|
1999-06-01 | no assertion criteria provided | Malaria, cerebral, susceptibility to |
germline
|
Detail |
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | migraine with aura | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | migraine with aura | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | Common Migraine | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | migraine with aura | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| 0.009 | Common Migraine | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | migraine with aura | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | Common Migraine | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | migraine with aura | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | Common Migraine | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| <0.001 | Common Migraine | Among active migraine with aura, the odds ratios (95% confidence intervals) were... | BeFree | 19559392 | Detail |
| 0.001 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
| 0.005 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
| 0.157 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
| 0.010 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
| <0.001 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
| 0.139 | malaria | A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800... | BeFree | 26448013 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NC_000006.12:g.31575186G>A AND Malaria, cerebral, susceptibility to | ClinVar | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| Among active migraine with aura, the odds ratios (95% confidence intervals) were 1.35 (1.0 to 1.81) ... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
| A GTGTGTC haplotype consisting of IL-1A (rs17561), IL-4 (rs2243250), TNF (rs1800750), IL-4R (rs18050... | DisGeNET | Detail |
- Gene
- -
- dbSNP
- rs1800750 dbSNP
- Genome
- hg19
- Position
- chr6:31,542,963-31,542,963
- Variant Type
- snv
- Reference Allele
- G
- Alternative Allele
- A
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