chr11:1853084:> Detail (hg38)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr11:1,874,314-1,913,493 |
| hg38 | chr11:1,853,084-1,892,263 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.242 | ulcerative colitis | NA | CTD_human,GAD,GWASCAT | Detail | |
| 0.120 | heart valve disease | NA | CTD_human | Detail | |
| 0.002 | Inflammation | NA | GAD | Detail | |
| 0.120 | Inflammatory Bowel Diseases | NA | GWASCAT | Detail | |
| 0.003 | Lymphoma, Non-Hodgkin | NA | BeFree,GAD | Detail | |
| <0.001 | melanoma | NA | BeFree | Detail | |
| <0.001 | pneumonia | Leukocyte-specific protein 1 regulates neutrophil recruitment in acute lung infl... | BeFree | 26320151 | Detail |
| <0.001 | Lymphoma, Large-Cell, Follicular | NA | BeFree | Detail | |
| <0.001 | pancreatic carcinoma | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of lung | NA | BeFree | Detail | |
| <0.001 | Adenocarcinoma of pancreas | NA | BeFree | Detail | |
| <0.001 | Malignant neoplasm of pancreas | NA | BeFree | Detail | |
| <0.001 | Carcinoma of lung | NA | BeFree | Detail | |
| 0.120 | Mammary Neoplasms | NA | CTD_human | Detail | |
| 0.121 | Mammographic Density | NA | BeFree,GWASCAT | Detail | |
| 0.162 | Malignant neoplasm of breast | Confirmed BC risk SNPs rs17468277 (CASP8), rs1982073 (TGFB1), rs2981582 (FGFR2),... | BeFree | 22532573 | Detail |
| 0.004 | breast carcinoma | Confirmed BC risk SNPs rs17468277 (CASP8), rs1982073 (TGFB1), rs2981582 (FGFR2),... | BeFree | 22532573 | Detail |
| <0.001 | Astrocytoma | NA | BeFree | Detail | |
| 0.120 | Malignant neoplasm of urinary bladder | NA | GWASCAT | Detail | |
| 0.120 | calcinosis | NA | CTD_human | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Leukocyte-specific protein 1 regulates neutrophil recruitment in acute lung inflammation. | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Confirmed BC risk SNPs rs17468277 (CASP8), rs1982073 (TGFB1), rs2981582 (FGFR2), rs13281615 (8q24), ... | DisGeNET | Detail |
| Confirmed BC risk SNPs rs17468277 (CASP8), rs1982073 (TGFB1), rs2981582 (FGFR2), rs13281615 (8q24), ... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs1982073 dbSNP
- Genome
- hg38
- Position
- chr11:1,853,084-1,892,263
- Variant Type
- snv
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