chr12:27485769:> Detail (hg19)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr12:27,485,769-27,578,222 |
| hg38 | chr12:27,332,836-27,425,289 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | colorectal carcinoma | NA | BeFree | Detail | |
| 0.002 | Mental Depression | NA | GAD | Detail | |
| 0.120 | IgA glomerulonephritis | NA | CTD_human | Detail | |
| <0.001 | mucopolysaccharidosis II | NA | BeFree | Detail | |
| <0.001 | Phobia, Social | NA | BeFree | Detail | |
| 0.002 | schizophrenia | NA | GAD | Detail | |
| <0.001 | Alcohol abuse | NA | BeFree | Detail | |
| 0.002 | Metabolic syndrome X | NA | GAD | Detail | |
| <0.001 | breast carcinoma | Stratification according to molecular subtype revealed prognostic relevance for ... | BeFree | 25485508 | Detail |
| <0.001 | colon carcinoma | NA | BeFree | Detail | |
| 0.002 | Sleep Disorders | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of breast | In women with three consecutive night shifts, a reduced risk of breast cancer wa... | BeFree | 23822714 | Detail |
| <0.001 | breast carcinoma | In women with three consecutive night shifts, a reduced risk of breast cancer wa... | BeFree | 23822714 | Detail |
| <0.001 | colorectal cancer | NA | BeFree | Detail | |
| <0.001 | alcohol use disorder | NA | BeFree | Detail | |
| <0.001 | Alzheimer's disease | The polymorphism of ARNTL2 (BMAL2) gene rs2306074 C>T is associated with suscept... | BeFree | 24847962 | Detail |
| 0.007 | bipolar disorder | NA | GAD | Detail | |
| <0.001 | Malignant neoplasm of breast | Stratification according to molecular subtype revealed prognostic relevance for ... | BeFree | 25485508 | Detail |
| <0.001 | Malignant tumor of colon | NA | BeFree | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Stratification according to molecular subtype revealed prognostic relevance for PER1, PER3, CRY2 and... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... | DisGeNET | Detail |
| In women with three consecutive night shifts, a reduced risk of breast cancer was associated with ca... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| The polymorphism of ARNTL2 (BMAL2) gene rs2306074 C>T is associated with susceptibility of Alzheimer... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
| Stratification according to molecular subtype revealed prognostic relevance for PER1, PER3, CRY2 and... | DisGeNET | Detail |
| NA | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs131113549 dbSNP
- Genome
- hg19
- Position
- chr12:27,485,769-27,578,222
- Variant Type
- snv
Genome browser