SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2
Information
- Symbol
- SOHLH2
- Type
- protein-coding
- Description
- spermatogenesis and oogenesis specific basic helix-loop-helix 2
- Entrez Gene ID
- 54937
- Genome
- hg19
- Position
- chr13:36,742,354-36,788,693
- Genome
- hg38
- Position
- chr13:36,168,217-36,214,556
- MIM
- 616066 OMIM
- HGNC
- HGNC:26026 HGNC
- Ensembl
- ENSG00000120669 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 6 |
| Likely benign | 0 | 22 |
| Uncertain significance | 0 | 42 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
70 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | SOSF2 |
| SYNONYM | SPATA28 |
| SYNONYM | TEB1 |
| SYNONYM | bHLHe81 |
| MIM | 616066 OMIM |
| HGNC | HGNC:26026 HGNC |
| Ensembl | ENSG00000120669 Ensembl |
| AllianceGenome | HGNC:26026 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000317764.6 | hg38 | chr13 | 36,181,992 | 36,214,588 | 32,597 |
| ENST00000379881.8 | hg38 | chr13 | 36,168,217 | 36,214,556 | 46,340 |
| ENST00000379881.8 | hg19 | chr13 | 36,742,354 | 36,788,693 | 46,340 |
| ENST00000317764.6 | hg19 | chr13 | 36,756,129 | 36,788,725 | 32,597 |
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