ENST00000379881.8 SOHLH2

Information
Transcript ID
ENST00000379881.8
Genome
hg38
Position
chr13:36,168,217-36,214,556
Strand
-
CDS length
1,278
Amino acid length
426
Gene symbol
SOHLH2
Gene type
protein-coding
Gene description
spermatogenesis and oogenesis specific basic helix-loop-helix 2
Gene Entrez Gene ID
54937
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 36,168,217 36,169,054
10 36,170,531 36,170,787
9 36,173,692 36,173,810
8 36,174,476 36,174,567
7 36,174,722 36,174,869
6 36,189,946 36,190,056
5 36,191,795 36,191,894
4 36,193,621 36,193,725
3 36,193,806 36,193,867
2 36,201,879 36,202,093
1 36,214,479 36,214,556
CDS
Exon number Type Start Stop
11 CDS 36,169,034 36,169,054
10 CDS 36,170,531 36,170,787
9 CDS 36,173,692 36,173,810
8 CDS 36,174,476 36,174,567
7 CDS 36,174,722 36,174,869
6 CDS 36,189,946 36,190,056
5 CDS 36,191,795 36,191,894
4 CDS 36,193,621 36,193,725
3 CDS 36,193,806 36,193,867
2 CDS 36,201,879 36,202,093
1 CDS 36,214,479 36,214,526
Other genome
Genome Chromosome Start End Links
hg19 chr13 36,742,354 36,788,693 Link
CDS sequence
ATGGCTTCCTCAATTATCTGCCAGGAGCACTGCCAGATCTCGGGCCAGGCAAAAATAGACATCTTATTAGTTGGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTTGCAAACATAGCAGAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTGGATGATTGCATATTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAGCTGGAAGCCATCAAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTTTTTATAATCCCTGAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTAACTGAACCACTGACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCCTCAAACACTGTTAAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAGAGGTCCTACAGCGAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCTTTAAGGAATGGCAATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAAAAGATCTCTCTTCTTCATTCAAGCAAGGAAAAACTAAGAAGGGAAAGAATCAAATATTGCTGTGAGCAGCTGCGTACTCTCTTGCCGTATGTAAAAGGGAGAAAGAATGATGCGGCTTCAGTTCTTGAGGCAACAGTTGATTATGTGAAATATATCCGGGAGAAAATCTCTCCAGCCGTTATGGCCCAGATTACAGAAGCACTTCAGAGCAACATGAGGTTTTGTAAGAAACAACAAACACCCATTGAGCTGTCTCTCCCAGGCACTGTCATGGCACAGCGGGAAAACAGTGTGATGAGCACTTACTCCCCTGAGAGAGGGCTCCAATTCCTGACTAATACGTGCTGGAATGGGTGCTCCACTCCTGATGCAGAGAGCTCCTTGGATGAAGCTGTGAGAGTTCCATCAAGCTCCGCCTCAGAGAATGCTATTGGTGATCCATATAAAACTCACATTTCCAGTGCAGCGCTGTCTCTGAATTCCTTGCATACTGTCAGATATTATTCTAAAGTCACCCCTTCCTACGATGCAACTGCTGTAACAAATCAGAACATTTCAATTCATTTACCTTCAGCCATGCCCCCGGTCTCAAAGCTTCTCCCTCGGCACTGCACTTCTGGGTTGGGCCAGACGTGCACTACACATCCCAACTGTCTGCAACAGTTTTGGGCGTATTAA
Amino sequence
MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAASVLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTPIELSLPGTVMAQRENSVMSTYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDPYKTHISSAALSLNSLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKLLPRHCTSGLGQTCTTHPNCLQQFWAY*