ENST00000379881.8 SOHLH2

Information
Transcript ID
ENST00000379881.8
Genome
hg19
Position
chr13:36,742,354-36,788,693
Strand
-
CDS length
1,278
Amino acid length
426
Gene symbol
SOHLH2
Gene type
protein-coding
Gene description
spermatogenesis and oogenesis specific basic helix-loop-helix 2
Gene Entrez Gene ID
54937
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 36,742,354 36,743,191
10 36,744,668 36,744,924
9 36,747,829 36,747,947
8 36,748,613 36,748,704
7 36,748,859 36,749,006
6 36,764,083 36,764,193
5 36,765,932 36,766,031
4 36,767,758 36,767,862
3 36,767,943 36,768,004
2 36,776,016 36,776,230
1 36,788,616 36,788,693
CDS
Exon number Type Start Stop
11 CDS 36,743,171 36,743,191
10 CDS 36,744,668 36,744,924
9 CDS 36,747,829 36,747,947
8 CDS 36,748,613 36,748,704
7 CDS 36,748,859 36,749,006
6 CDS 36,764,083 36,764,193
5 CDS 36,765,932 36,766,031
4 CDS 36,767,758 36,767,862
3 CDS 36,767,943 36,768,004
2 CDS 36,776,016 36,776,230
1 CDS 36,788,616 36,788,663
Other genome
Genome Chromosome Start End Links
hg38 chr13 36,168,217 36,214,556 Link
CDS sequence
ATGGCTTCCTCAATTATCTGCCAGGAGCACTGCCAGATCTCGGGCCAGGCAAAAATAGACATCTTATTAGTTGGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTTGCAAACATAGCAGAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTGGATGATTGCATATTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAGCTGGAAGCCATCAAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTTTTTATAATCCCTGAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTAACTGAACCACTGACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCCTCAAACACTGTTAAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAGAGGTCCTACAGCGAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCTTTAAGGAATGGCAATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAAAAGATCTCTCTTCTTCATTCAAGCAAGGAAAAACTAAGAAGGGAAAGAATCAAATATTGCTGTGAGCAGCTGCGTACTCTCTTGCCGTATGTAAAAGGGAGAAAGAATGATGCGGCTTCAGTTCTTGAGGCAACAGTTGATTATGTGAAATATATCCGGGAGAAAATCTCTCCAGCCGTTATGGCCCAGATTACAGAAGCACTTCAGAGCAACATGAGGTTTTGTAAGAAACAACAAACACCCATTGAGCTGTCTCTCCCAGGCACTGTCATGGCACAGCGGGAAAACAGTGTGATGAGCACTTACTCCCCTGAGAGAGGGCTCCAATTCCTGACTAATACGTGCTGGAATGGGTGCTCCACTCCTGATGCAGAGAGCTCCTTGGATGAAGCTGTGAGAGTTCCATCAAGCTCCGCCTCAGAGAATGCTATTGGTGATCCATATAAAACTCACATTTCCAGTGCAGCGCTGTCTCTGAATTCCTTGCATACTGTCAGATATTATTCTAAAGTCACCCCTTCCTACGATGCAACTGCTGTAACAAATCAGAACATTTCAATTCATTTACCTTCAGCCATGCCCCCGGTCTCAAAGCTTCTCCCTCGGCACTGCACTTCTGGGTTGGGCCAGACGTGCACTACACATCCCAACTGTCTGCAACAGTTTTGGGCGTATTAA
Amino sequence
MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAASVLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTPIELSLPGTVMAQRENSVMSTYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDPYKTHISSAALSLNSLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKLLPRHCTSGLGQTCTTHPNCLQQFWAY*