ENST00000317764.6 SOHLH2
Information
- Transcript ID
- ENST00000317764.6
- Genome
- hg19
- Position
- chr13:36,756,129-36,788,725
- Strand
- -
- CDS length
- 678
- Amino acid length
- 226
- Gene symbol
- SOHLH2
- Gene type
- protein-coding
- Gene description
- spermatogenesis and oogenesis specific basic helix-loop-helix 2
- Gene Entrez Gene ID
- 54937
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 36,756,129 | 36,757,334 |
| 6 | 36,764,083 | 36,764,193 |
| 5 | 36,765,932 | 36,766,031 |
| 4 | 36,767,758 | 36,767,862 |
| 3 | 36,767,943 | 36,768,004 |
| 2 | 36,776,016 | 36,776,230 |
| 1 | 36,788,616 | 36,788,725 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 36,757,298 | 36,757,334 |
| 6 | CDS | 36,764,083 | 36,764,193 |
| 5 | CDS | 36,765,932 | 36,766,031 |
| 4 | CDS | 36,767,758 | 36,767,862 |
| 3 | CDS | 36,767,943 | 36,768,004 |
| 2 | CDS | 36,776,016 | 36,776,230 |
| 1 | CDS | 36,788,616 | 36,788,663 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr13 | 36,181,992 | 36,214,588 | Link |
CDS sequence
ATGGCTTCCTCAATTATCTGCCAGGAGCACTGCCAGATCTCGGGCCAGGCAAAAATAGACATCTTATTAGTTGGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTTGCAAACATAGCAGAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTGGATGATTGCATATTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAGCTGGAAGCCATCAAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTTTTTATAATCCCTGAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTAACTGAACCACTGACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCCTCAAACACTGTTAAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAGAGGTCCTACAGCGAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCTTTAAGGAATGGCAATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAAAAGATCTCTCTTCTTCATTCAAGCAAGGAAAAACTAAGAAGGCTGTACAGGAAGCATAGCAGCTTCTGTTTCTGGTGA
Amino sequence
MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRLYRKHSSFCFW*