chr17:43877954:A>G Detail (hg19) (CRHR1, LINC02210-CRHR1)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr17:43,877,954-43,877,954 |
| hg38 | chr17:45,800,588-45,800,588 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_004382.4:c.34-6422A>G | |
| NM_001145147.1:c.34-6422A>G | ||
| NM_001145146.1:c.34-6422A>G |
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_001256299.2:c.-492-6422A>G | |
| Ensemble | ENST00000634540.1:c.-492-6422A>G |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Links
| Type | Database | ID | Link |
|---|---|---|---|
| Gene | MIM | 122561 | OMIM |
| HGNC | 2357 | HGNC | |
| Ensembl | ENSG00000120088 | Ensembl | |
| NCBI | NCBI | ||
| Gene Cards | Gene Cards | ||
| OncoKB | OncoKB |
| Type | Database | ID | Link |
|---|---|---|---|
| Variant | TogoVar | ||
| COSMIC | |||
| MONDO |
| Type | Database | ID | Link |
|---|---|---|---|
| Gene | MIM | ||
| HGNC | 51483 | HGNC | |
| Ensembl | ENSG00000263715 | Ensembl | |
| NCBI | NCBI | ||
| Gene Cards | Gene Cards | ||
| OncoKB | OncoKB |
| Type | Database | ID | Link |
|---|---|---|---|
| Variant | TogoVar | ||
| COSMIC | |||
| MONDO |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | generalized anxiety disorder | Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine re... | BeFree | 22249355 | Detail |
| 0.127 | major depressive disorder | Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine re... | BeFree | 22249355 | Detail |
| 0.002 | Unipolar Depression | Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine re... | BeFree | 22249355 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine response in MDD (P=0.0... | DisGeNET | Detail |
| Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine response in MDD (P=0.0... | DisGeNET | Detail |
| Only rs4792888 in CRHR1 showed modest evidence of association with duloxetine response in MDD (P=0.0... | DisGeNET | Detail |
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs4792888 dbSNP
- Genome
- hg19
- Position
- chr17:43,877,954-43,877,954
- Variant Type
- snv
- Reference Allele
- A
- Alternative Allele
- G
Genome browser