chr17:36101156:C>T Detail (hg19) (HNF1B)

Information

Genome

Assembly Position
hg19 chr17:36,101,156-36,101,156
hg38 chr17:37,741,165-37,741,165 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_000458.3:c.345-1526G>A
NM_001165923.3:c.345-1526G>A
NM_001304286.1:c.345-1526G>A
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Type Database ID Link
Gene MIM 189907 OMIM
HGNC 11630 HGNC
Ensembl ENSG00000275410 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.002 Diabetes Mellitus, Non-Insulin-Dependent Besides, the haplotype-based analysis demonstrated that AGT in block rs752010-rs... BeFree 23300827 Detail
0.564 Diabetes Mellitus, Non-Insulin-Dependent Not only did an association between WFS1-rs6446482 and early-onset T2D exist in ... BeFree 20509872 Detail
0.145 Prostatic Neoplasms [Identification of seven new prostate cancer susceptibility loci through a genom... GAD 19767753 Detail
0.145 Prostatic Neoplasms [Genome-wide association study identifies new prostate cancer susceptibility loc... GAD 21743057 Detail
0.169 Malignant neoplasm of prostate Identification of seven new prostate cancer susceptibility loci through a genome... GWASCAT 19767753 Detail
0.145 Prostatic Neoplasms [Multiple newly identified loci associated with prostate cancer susceptibility.] GAD 18264097 Detail
0.120 Testicular Germ Cell Tumor Two new loci and gene sets related to sex determination and cancer progression a... GWASCAT 25877299 Detail
0.145 Prostatic Neoplasms [Genome-wide association study identifies five new susceptibility loci for prost... GAD 20676098 Detail
0.169 Malignant neoplasm of prostate Multiple newly identified loci associated with prostate cancer susceptibility. GWASCAT 18264097 Detail
0.169 Malignant neoplasm of prostate Genome-wide association study identifies five new susceptibility loci for prosta... GWASCAT 20676098 Detail
Annotation

Annotations

DescrptionSourceLinks
Besides, the haplotype-based analysis demonstrated that AGT in block rs752010-rs4430796-rs7501939 wa... DisGeNET Detail
Not only did an association between WFS1-rs6446482 and early-onset T2D exist in the subgroup analysi... DisGeNET Detail
[Identification of seven new prostate cancer susceptibility loci through a genome-wide association s... DisGeNET Detail
[Genome-wide association study identifies new prostate cancer susceptibility loci.] DisGeNET Detail
Identification of seven new prostate cancer susceptibility loci through a genome-wide association st... DisGeNET Detail
[Multiple newly identified loci associated with prostate cancer susceptibility.] DisGeNET Detail
Two new loci and gene sets related to sex determination and cancer progression are associated with s... DisGeNET Detail
[Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Ja... DisGeNET Detail
Multiple newly identified loci associated with prostate cancer susceptibility. DisGeNET Detail
Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Jap... DisGeNET Detail

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs7501939 dbSNP
Genome
hg19
Position
chr17:36,101,156-36,101,156
Variant Type
snv
Reference Allele
C
Alternative Allele
T
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