ENST00000625836.2 VOPP1

Information
Transcript ID
ENST00000625836.2
Genome
hg38
Position
chr7:55,471,968-55,538,660
Strand
-
CDS length
510
Amino acid length
170
Gene symbol
VOPP1
Gene type
protein-coding
Gene description
VOPP1 WW domain binding protein
Gene Entrez Gene ID
81552
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 55,471,968 55,473,045
4 55,492,282 55,492,418
3 55,497,613 55,497,690
2 55,521,072 55,521,130
1 55,538,613 55,538,660
CDS
Exon number Type Start Stop
5 CDS 55,472,855 55,473,045
4 CDS 55,492,282 55,492,418
3 CDS 55,497,613 55,497,690
2 CDS 55,521,072 55,521,130
1 CDS 55,538,613 55,538,657
Other genome
Genome Chromosome Start End Links
hg19 chr7 55,539,661 55,606,353 Link
CDS sequence
ATGCTCAGCGAAACTCTTGGGTATCTGTCTTCTGTGCTCTTGCAGTGCACAGAAGCCAAAAAGCATTGCTGGTATTTCGAAGGACTCTATCCAACCTATTATATATGCCGCTCCTACGAGGACTGCTGTGGCTCCAGGTGCTGTGTGCGGGCCCTCTCCATACAGAGGCTGTGGTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCAATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACACCGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAACTCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAACAGGTAGTGAAGGCCAAGTAG
Amino sequence
MLSETLGYLSSVLLQCTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRLWYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK*