ENST00000625836.2 VOPP1

Information
Transcript ID
ENST00000625836.2
Genome
hg19
Position
chr7:55,539,661-55,606,353
Strand
-
CDS length
510
Amino acid length
170
Gene symbol
VOPP1
Gene type
protein-coding
Gene description
VOPP1 WW domain binding protein
Gene Entrez Gene ID
81552
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 55,539,661 55,540,738
4 55,559,975 55,560,111
3 55,565,306 55,565,383
2 55,588,765 55,588,823
1 55,606,306 55,606,353
CDS
Exon number Type Start Stop
5 CDS 55,540,548 55,540,738
4 CDS 55,559,975 55,560,111
3 CDS 55,565,306 55,565,383
2 CDS 55,588,765 55,588,823
1 CDS 55,606,306 55,606,350
Other genome
Genome Chromosome Start End Links
hg38 chr7 55,471,968 55,538,660 Link
CDS sequence
ATGCTCAGCGAAACTCTTGGGTATCTGTCTTCTGTGCTCTTGCAGTGCACAGAAGCCAAAAAGCATTGCTGGTATTTCGAAGGACTCTATCCAACCTATTATATATGCCGCTCCTACGAGGACTGCTGTGGCTCCAGGTGCTGTGTGCGGGCCCTCTCCATACAGAGGCTGTGGTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCAATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACACCGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAACTCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAACAGGTAGTGAAGGCCAAGTAG
Amino sequence
MLSETLGYLSSVLLQCTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRLWYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK*