ENST00000376626.5 VSTM1

Information
Transcript ID
ENST00000376626.5
Genome
hg38
Position
chr19:54,040,833-54,063,953
Strand
-
CDS length
618
Amino acid length
206
Gene symbol
VSTM1
Gene type
protein-coding
Gene description
V-set and transmembrane domain containing 1
Gene Entrez Gene ID
284415
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 54,040,833 54,041,080
7 54,041,779 54,041,816
6 54,041,916 54,041,953
5 54,042,169 54,042,196
4 54,051,410 54,051,448
3 54,058,306 54,058,590
2 54,058,697 54,058,732
1 54,063,744 54,063,953
CDS
Exon number Type Start Stop
8 CDS 54,040,961 54,041,080
7 CDS 54,041,779 54,041,816
6 CDS 54,041,916 54,041,953
5 CDS 54,042,169 54,042,196
4 CDS 54,051,410 54,051,448
3 CDS 54,058,306 54,058,590
2 CDS 54,058,697 54,058,732
1 CDS 54,063,744 54,063,777
Other genome
Genome Chromosome Start End Links
hg19 chr19 54,544,087 54,567,207 Link
CDS sequence
ATGACCGCAGAATTCCTCTCCCTGCTTTGCCTCGGGCTGTGTCTGGGCTACGAAGATGAGAAAAAGAATGAGAAACCGCCCAAGCCCTCCCTCCACGCCTGGCCCAGCTCGGTGGTTGAAGCCGAGAGCAATGTGACCCTGAAGTGTCAGGCTCATTCCCAGAATGTGACATTTGTGCTGCGCAAGGTGAACGACTCTGGGTACAAGCAGGAACAGAGCTCGGCAGAAAACGAAGCTGAATTCCCCTTCACGGACCTGAAGCCTAAGGATGCTGGGAGGTACTTTTGTGCCTACAAGACAACAGCCTCCCATGAGTGGTCAGAAAGCAGTGAACACTTGCAGCTGGTGGTCACAGATAAACACGATGAACTTGAAGCTCCCTCAATGAAAACAGGTTCATCATCTGAGGAATCCACCAAGAGAACCAGCCATTCCAAACTTCCGGAGCAGGAGGCTGCCGAGGCAGATTTATCCAATATGGAAAGGGTATCTCTCTCGACGGCAGACCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCTGTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAATATGCGGCACTGAAAGTGTAG
Amino sequence
MTAEFLSLLCLGLCLGYEDEKKNEKPPKPSLHAWPSSVVEAESNVTLKCQAHSQNVTFVLRKVNDSGYKQEQSSAENEAEFPFTDLKPKDAGRYFCAYKTTASHEWSESSEHLQLVVTDKHDELEAPSMKTGSSSEESTKRTSHSKLPEQEAAEADLSNMERVSLSTADPQGVTYAELSTSALSEAASDTTQEPPGSHEYAALKV*