ENST00000376626.5 VSTM1

Information
Transcript ID
ENST00000376626.5
Genome
hg19
Position
chr19:54,544,087-54,567,207
Strand
-
CDS length
618
Amino acid length
206
Gene symbol
VSTM1
Gene type
protein-coding
Gene description
V-set and transmembrane domain containing 1
Gene Entrez Gene ID
284415
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 54,544,087 54,544,334
7 54,545,033 54,545,070
6 54,545,170 54,545,207
5 54,545,423 54,545,450
4 54,554,664 54,554,702
3 54,561,560 54,561,844
2 54,561,951 54,561,986
1 54,566,998 54,567,207
CDS
Exon number Type Start Stop
8 CDS 54,544,215 54,544,334
7 CDS 54,545,033 54,545,070
6 CDS 54,545,170 54,545,207
5 CDS 54,545,423 54,545,450
4 CDS 54,554,664 54,554,702
3 CDS 54,561,560 54,561,844
2 CDS 54,561,951 54,561,986
1 CDS 54,566,998 54,567,031
Other genome
Genome Chromosome Start End Links
hg38 chr19 54,040,833 54,063,953 Link
CDS sequence
ATGACCGCAGAATTCCTCTCCCTGCTTTGCCTCGGGCTGTGTCTGGGCTACGAAGATGAGAAAAAGAATGAGAAACCGCCCAAGCCCTCCCTCCACGCCTGGCCCAGCTCGGTGGTTGAAGCCGAGAGCAATGTGACCCTGAAGTGTCAGGCTCATTCCCAGAATGTGACATTTGTGCTGCGCAAGGTGAACGACTCTGGGTACAAGCAGGAACAGAGCTCGGCAGAAAACGAAGCTGAATTCCCCTTCACGGACCTGAAGCCTAAGGATGCTGGGAGGTACTTTTGTGCCTACAAGACAACAGCCTCCCATGAGTGGTCAGAAAGCAGTGAACACTTGCAGCTGGTGGTCACAGATAAACACGATGAACTTGAAGCTCCCTCAATGAAAACAGGTTCATCATCTGAGGAATCCACCAAGAGAACCAGCCATTCCAAACTTCCGGAGCAGGAGGCTGCCGAGGCAGATTTATCCAATATGGAAAGGGTATCTCTCTCGACGGCAGACCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCTGTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAATATGCGGCACTGAAAGTGTAG
Amino sequence
MTAEFLSLLCLGLCLGYEDEKKNEKPPKPSLHAWPSSVVEAESNVTLKCQAHSQNVTFVLRKVNDSGYKQEQSSAENEAEFPFTDLKPKDAGRYFCAYKTTASHEWSESSEHLQLVVTDKHDELEAPSMKTGSSSEESTKRTSHSKLPEQEAAEADLSNMERVSLSTADPQGVTYAELSTSALSEAASDTTQEPPGSHEYAALKV*