ENST00000398453.7 SMAGP
Information
- Transcript ID
- ENST00000398453.7
- Genome
- hg38
- Position
- chr12:51,245,351-51,270,198
- Strand
- -
- CDS length
- 294
- Amino acid length
- 98
- Gene symbol
- SMAGP
- Gene type
- protein-coding
- Gene description
- small cell adhesion glycoprotein
- Gene Entrez Gene ID
- 57228
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 51,245,351 | 51,246,119 |
| 3 | 51,246,751 | 51,246,831 |
| 2 | 51,269,245 | 51,269,316 |
| 1 | 51,270,059 | 51,270,198 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 51,245,941 | 51,246,119 |
| 3 | CDS | 51,246,751 | 51,246,831 |
| 2 | CDS | 51,269,245 | 51,269,278 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 51,639,135 | 51,663,982 | Link |
CDS sequence
ATGACCAGCCTCCTGACTACTCCTTCTCCAAGAGAAGAACTGATGACCACCCCAATTTTACAGCCCACTGAGGCCCTGTCCCCAGAAGATGGAGCCAGCACAGCACTCATTGCAGTTGTTATCACCGTTGTCTTCCTCACCCTGCTCTCGGTCGTGATCTTGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTATGAACCTACAGAAGGTGAGCCCAGTGCCATCGTCCAGATGGAGAGTGACTTGGCCAAGGGCAGCGAGAAAGAGGAATATTTCATCTAA
Amino sequence
MTSLLTTPSPREELMTTPILQPTEALSPEDGASTALIAVVITVVFLTLLSVVILIFFYLYKNKGSYVTYEPTEGEPSAIVQMESDLAKGSEKEEYFI*