SMAGP small cell adhesion glycoprotein
Information
- Symbol
- SMAGP
- Type
- protein-coding
- Description
- small cell adhesion glycoprotein
- Entrez Gene ID
- 57228
- Genome
- hg19
- Position
- chr12:51,638,342-51,664,199
- Genome
- hg38
- Position
- chr12:51,244,558-51,270,415
- HGNC
- HGNC:26918 HGNC
- Ensembl
- ENSG00000170545 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 12 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
12 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | hSMAGP |
| HGNC | HGNC:26918 HGNC |
| Ensembl | ENSG00000170545 Ensembl |
| AllianceGenome | HGNC:26918 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000603838.5 | hg38 | chr12 | 51,246,464 | 51,269,912 | 23,449 |
| ENST00000604188.1 | hg38 | chr12 | 51,246,597 | 51,270,184 | 23,588 |
| ENST00000603798.6 | hg38 | chr12 | 51,244,558 | 51,270,415 | 25,858 |
| ENST00000603864.5 | hg38 | chr12 | 51,245,388 | 51,269,949 | 24,562 |
| ENST00000605627.1 | hg38 | chr12 | 51,245,745 | 51,270,284 | 24,540 |
| ENST00000398453.7 | hg38 | chr12 | 51,245,351 | 51,270,198 | 24,848 |
| ENST00000603798.6 | hg19 | chr12 | 51,638,342 | 51,664,199 | 25,858 |
| ENST00000398453.7 | hg19 | chr12 | 51,639,135 | 51,663,982 | 24,848 |
| ENST00000603864.5 | hg19 | chr12 | 51,639,172 | 51,663,733 | 24,562 |
| ENST00000605627.1 | hg19 | chr12 | 51,639,529 | 51,664,068 | 24,540 |
| ENST00000603838.5 | hg19 | chr12 | 51,640,248 | 51,663,696 | 23,449 |
| ENST00000604188.1 | hg19 | chr12 | 51,640,381 | 51,663,968 | 23,588 |
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