ENST00000398453.7 SMAGP

Information
Transcript ID
ENST00000398453.7
Genome
hg19
Position
chr12:51,639,135-51,663,982
Strand
-
CDS length
294
Amino acid length
98
Gene symbol
SMAGP
Gene type
protein-coding
Gene description
small cell adhesion glycoprotein
Gene Entrez Gene ID
57228
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 51,639,135 51,639,903
3 51,640,535 51,640,615
2 51,663,029 51,663,100
1 51,663,843 51,663,982
CDS
Exon number Type Start Stop
4 CDS 51,639,725 51,639,903
3 CDS 51,640,535 51,640,615
2 CDS 51,663,029 51,663,062
Other genome
Genome Chromosome Start End Links
hg38 chr12 51,245,351 51,270,198 Link
CDS sequence
ATGACCAGCCTCCTGACTACTCCTTCTCCAAGAGAAGAACTGATGACCACCCCAATTTTACAGCCCACTGAGGCCCTGTCCCCAGAAGATGGAGCCAGCACAGCACTCATTGCAGTTGTTATCACCGTTGTCTTCCTCACCCTGCTCTCGGTCGTGATCTTGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTATGAACCTACAGAAGGTGAGCCCAGTGCCATCGTCCAGATGGAGAGTGACTTGGCCAAGGGCAGCGAGAAAGAGGAATATTTCATCTAA
Amino sequence
MTSLLTTPSPREELMTTPILQPTEALSPEDGASTALIAVVITVVFLTLLSVVILIFFYLYKNKGSYVTYEPTEGEPSAIVQMESDLAKGSEKEEYFI*