ENST00000301019.9 CDT1

Information
Transcript ID
ENST00000301019.9
Genome
hg38
Position
chr16:88,803,789-88,809,258
Strand
+
CDS length
1,641
Amino acid length
547
Gene symbol
CDT1
Gene type
protein-coding
Gene description
chromatin licensing and DNA replication factor 1
Gene Entrez Gene ID
81620
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,803,789 88,804,059
2 88,804,545 88,804,667
3 88,804,762 88,804,898
4 88,805,440 88,805,637
5 88,805,724 88,805,869
6 88,806,021 88,806,121
7 88,806,486 88,806,674
8 88,807,051 88,807,203
9 88,807,281 88,807,482
10 88,808,115 88,809,258
CDS
Exon number Type Start Stop
1 CDS 88,803,832 88,804,059
2 CDS 88,804,545 88,804,667
3 CDS 88,804,762 88,804,898
4 CDS 88,805,440 88,805,637
5 CDS 88,805,724 88,805,869
6 CDS 88,806,021 88,806,121
7 CDS 88,806,486 88,806,674
8 CDS 88,807,051 88,807,203
9 CDS 88,807,281 88,807,482
10 CDS 88,808,115 88,808,278
Other genome
Genome Chromosome Start End Links
hg19 chr16 88,870,197 88,875,666 Link
CDS sequence
ATGGAGCAGCGCCGCGTCACCGACTTCTTCGCGCGCCGCCGCCCCGGGCCCCCCCGCATCGCGCCGCCCAAGCTGGCCTGCCGCACCCCCAGCCCCGCCAGGCCCGCACTCCGCGCCCCGGCCTCCGCTACCAGTGGCAGCCGCAAGCGCGCCCGCCCGCCCGCCGCCCCCGGACGCGACCAGGCCAGGCCACCGGCCCGCAGGAGACTGCGGCTGTCGGTGGACGAGGTTTCCAGCCCCAGTACCCCCGAGGCCCCAGACATCCCAGCCTGCCCTTCTCCGGGCCAGAAGATAAAGAAATCCACCCCGGCAGCAGGTCAGCCGCCCCACCTGACATCCGCGCAGGACCAGGACACCATCTCTGAGCTTGCGTCATGCCTGCAACGGGCCCGGGAGCTGGGGGCAAGAGTCCGGGCGCTGAAGGCCAGTGCCCAGGATGCTGGGGAGTCCTGCACCCCAGAGGCCGAGGGCCGCCCTGAGGAGCCATGTGGCGAGAAGGCGCCCGCCTACCAGCGCTTCCATGCCCTGGCCCAGCCCGGCCTGCCGGGACTCGTGCTGCCCTACAAGTACCAGGTGCTGGCGGAGATGTTCCGCAGCATGGACACCATCGTGGGCATGCTCCACAACCGCTCCGAGACGCCCACCTTTGCCAAGGTCCAGCGGGGCGTCCAGGACATGATGCGTAGGCGTTTTGAGGAGTGCAATGTTGGCCAGATCAAAACCGTGTACCCGGCCTCCTACCGCTTCCGCCAGGAGCGCAGTGTCCCCACCTTCAAGGATGGCACCAGGAGGTCAGATTACCAGCTCACCATCGAGCCACTGCTGGAGCAGGAGGCTGACGGAGCAGCCCCCCAGCTCACGGCCTCGCGCCTCCTGCAGCGACGGCAGATCTTCAGCCAGAAGCTGGTGGAGCATGTCAAGGAGCACCACAAGGCCTTCCTGGCCTCCCTGAGCCCCGCCATGGTGGTGCCGGAGGACCAGCTGACCCGCTGGCACCCGCGCTTCAACGTGGATGAAGTACCCGACATCGAGCCGGCCGCGCTGCCCCAGCCACCCGCCACGGAGAAGCTCACCACTGCTCAGGAGGTGCTGGCCCGGGCCCGCAACCTGATTTCACCCAGGATGGAGAAGGCCTTGAGTCAATTGGCCCTGCGCTCTGCTGCGCCCAGCAGCCCCGGGTCTCCCAGGCCAGCACTGCCGGCTACCCCACCAGCCACCCCGCCTGCAGCCTCTCCCAGTGCTCTGAAGGGGGTGTCCCAGGATCTGCTGGAGCGGATCCGAGCCAAGGAGGCACAGAAGCAGCTGGCACAGATGACGCGGTGCCCGGAGCAGGAGCAGCGGCTGCAGCGCTTAGAACGGCTGCCTGAGCTGGCCCGCGTGCTGCGGAGCGTCTTTGTGTCCGAACGCAAGCCTGCGCTCAGCATGGAGGTGGCCTGTGCCAGGATGGTGGGCAGCTGTTGTACTATCATGAGCCCTGGGGAAATGGAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGCCGGACTGGCTCAGCCTCCACCGCATCCGCACCGACACCTACGTCAAGCTGGACAAGGCCGCGGACCTCGCCCACATCACTGCACGCCTGGCCCACCAGACACGTGCTGAGGAGGGGCTGTGA
Amino sequence
MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQDLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACARMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQTRAEEGL*