CDT1 chromatin licensing and DNA replication factor 1

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Variants
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Information

Symbol: CDT1
Type: protein-coding
Description: chromatin licensing and DNA replication factor 1
Entrez Gene ID: 81620
Genome: hg19
Position: chr16:88,870,197-88,875,666
Genome: hg38
Position: chr16:88,803,789-88,809,258
MIM: 605525 OMIM
HGNC: HGNC:24576 HGNC
Ensembl: ENSG00000167513 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	28
Likely pathogenic	0	12
Benign	0	104
Likely benign	0	284
Conflicting classifications of pathogenicity	0	26
not provided	0	2
Uncertain significance	0	358

Ranking

	ClinVar
	0
	0
	146
	614
	8

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	DUP
SYNONYM	RIS2
MIM	605525 OMIM
HGNC	HGNC:24576 HGNC
Ensembl	ENSG00000167513 Ensembl
AllianceGenome	HGNC:24576

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000301019.9	hg38	chr16	88,803,789	88,809,258	5,470
ENST00000301019.9	hg19	chr16	88,870,197	88,875,666	5,470

Key	Value
strand	+
UniProt	OG
start	88,870,185
Gene Symbol	CDT1
Entrez GeneId	81,620
Chr Band	16q24.3
end	88,875,665
chr	chr16

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