ENST00000301019.9 CDT1

Information
Transcript ID
ENST00000301019.9
Genome
hg19
Position
chr16:88,870,197-88,875,666
Strand
+
CDS length
1,641
Amino acid length
547
Gene symbol
CDT1
Gene type
protein-coding
Gene description
chromatin licensing and DNA replication factor 1
Gene Entrez Gene ID
81620
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,870,197 88,870,467
2 88,870,953 88,871,075
3 88,871,170 88,871,306
4 88,871,848 88,872,045
5 88,872,132 88,872,277
6 88,872,429 88,872,529
7 88,872,894 88,873,082
8 88,873,459 88,873,611
9 88,873,689 88,873,890
10 88,874,523 88,875,666
CDS
Exon number Type Start Stop
1 CDS 88,870,240 88,870,467
2 CDS 88,870,953 88,871,075
3 CDS 88,871,170 88,871,306
4 CDS 88,871,848 88,872,045
5 CDS 88,872,132 88,872,277
6 CDS 88,872,429 88,872,529
7 CDS 88,872,894 88,873,082
8 CDS 88,873,459 88,873,611
9 CDS 88,873,689 88,873,890
10 CDS 88,874,523 88,874,686
Other genome
Genome Chromosome Start End Links
hg38 chr16 88,803,789 88,809,258 Link
CDS sequence
ATGGAGCAGCGCCGCGTCACCGACTTCTTCGCGCGCCGCCGCCCCGGGCCCCCCCGCATCGCGCCGCCCAAGCTGGCCTGCCGCACCCCCAGCCCCGCCAGGCCCGCACTCCGCGCCCCGGCCTCCGCTACCAGTGGCAGCCGCAAGCGCGCCCGCCCGCCCGCCGCCCCCGGACGCGACCAGGCCAGGCCACCGGCCCGCAGGAGACTGCGGCTGTCGGTGGACGAGGTTTCCAGCCCCAGTACCCCCGAGGCCCCAGACATCCCAGCCTGCCCTTCTCCGGGCCAGAAGATAAAGAAATCCACCCCGGCAGCAGGTCAGCCGCCCCACCTGACATCCGCGCAGGACCAGGACACCATCTCTGAGCTTGCGTCATGCCTGCAACGGGCCCGGGAGCTGGGGGCAAGAGTCCGGGCGCTGAAGGCCAGTGCCCAGGATGCTGGGGAGTCCTGCACCCCAGAGGCCGAGGGCCGCCCTGAGGAGCCATGTGGCGAGAAGGCGCCCGCCTACCAGCGCTTCCATGCCCTGGCCCAGCCCGGCCTGCCGGGACTCGTGCTGCCCTACAAGTACCAGGTGCTGGCGGAGATGTTCCGCAGCATGGACACCATCGTGGGCATGCTCCACAACCGCTCCGAGACGCCCACCTTTGCCAAGGTCCAGCGGGGCGTCCAGGACATGATGCGTAGGCGTTTTGAGGAGTGCAATGTTGGCCAGATCAAAACCGTGTACCCGGCCTCCTACCGCTTCCGCCAGGAGCGCAGTGTCCCCACCTTCAAGGATGGCACCAGGAGGTCAGATTACCAGCTCACCATCGAGCCACTGCTGGAGCAGGAGGCTGACGGAGCAGCCCCCCAGCTCACGGCCTCGCGCCTCCTGCAGCGACGGCAGATCTTCAGCCAGAAGCTGGTGGAGCATGTCAAGGAGCACCACAAGGCCTTCCTGGCCTCCCTGAGCCCCGCCATGGTGGTGCCGGAGGACCAGCTGACCCGCTGGCACCCGCGCTTCAACGTGGATGAAGTACCCGACATCGAGCCGGCCGCGCTGCCCCAGCCACCCGCCACGGAGAAGCTCACCACTGCTCAGGAGGTGCTGGCCCGGGCCCGCAACCTGATTTCACCCAGGATGGAGAAGGCCTTGAGTCAATTGGCCCTGCGCTCTGCTGCGCCCAGCAGCCCCGGGTCTCCCAGGCCAGCACTGCCGGCTACCCCACCAGCCACCCCGCCTGCAGCCTCTCCCAGTGCTCTGAAGGGGGTGTCCCAGGATCTGCTGGAGCGGATCCGAGCCAAGGAGGCACAGAAGCAGCTGGCACAGATGACGCGGTGCCCGGAGCAGGAGCAGCGGCTGCAGCGCTTAGAACGGCTGCCTGAGCTGGCCCGCGTGCTGCGGAGCGTCTTTGTGTCCGAACGCAAGCCTGCGCTCAGCATGGAGGTGGCCTGTGCCAGGATGGTGGGCAGCTGTTGTACTATCATGAGCCCTGGGGAAATGGAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGCCGGACTGGCTCAGCCTCCACCGCATCCGCACCGACACCTACGTCAAGCTGGACAAGGCCGCGGACCTCGCCCACATCACTGCACGCCTGGCCCACCAGACACGTGCTGAGGAGGGGCTGTGA
Amino sequence
MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQDLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACARMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQTRAEEGL*