ENST00000441580.5 CPSF4

Information
Transcript ID
ENST00000441580.5
Genome
hg19
Position
chr7:99,036,999-99,054,212
Strand
+
CDS length
576
Amino acid length
192
Gene symbol
CPSF4
Gene type
protein-coding
Gene description
cleavage and polyadenylation specific factor 4
Gene Entrez Gene ID
10898
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 99,036,999 99,037,219
2 99,042,412 99,042,462
3 99,045,744 99,045,896
4 99,047,899 99,047,994
5 99,048,325 99,048,418
6 99,049,991 99,050,063
7 99,051,664 99,051,759
8 99,054,055 99,054,212
CDS
Exon number Type Start Stop
3 CDS 99,045,749 99,045,896
4 CDS 99,047,899 99,047,994
5 CDS 99,048,325 99,048,418
6 CDS 99,049,991 99,050,063
7 CDS 99,051,664 99,051,759
8 CDS 99,054,055 99,054,123
Other genome
Genome Chromosome Start End Links
hg38 chr7 99,439,376 99,456,589 Link
CDS sequence
ATGTGTCCGTTTCGCCACATCAGTGGTGAGAAGACAGTTGTGTGCAAACACTGGCTGCGTGGCCTATGCAAGAAAGGGGACCAGTGTGAGTTCCTGCATGAGTATGACATGACCAAGATGCCCGAGTGCTACTTCTACTCCAAGTTCGGGGAGTGCAGCAACAAGGAATGTCCCTTCCTGCACATCGACCCCGAGTCCAAGATCAAGGACTGTCCTTGGTATGACCGTGGCTTCTGCAAGCACGGTCCCCTCTGCAGGCACCGGCACACACGGAGAGTCATCTGTGTGAATTACCTCGTGGGATTCTGCCCGGAGGGGCCCTCGTGTAAATTCATGCACCCTCGATTTGAACTGCCCATGGGAACCACCGAGCAGCCCCCACTGCCGCAGCAGACACAGCCTCCAGCAAAGCAGAGAACCCCGCAGGTCATCGGGGTCATGCAGAGTCAAAACAGCAGCGCGGGCAACCGGGGACCCCGGCCACTGGAGCAGGTCACCTGTTACAAGTGTGGCGAGAAAGGACACTACGCCAACAGATGCACCAAAGGGCACTTGGCCTTTCTCAGTGGACAGTGA
Amino sequence
MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPPLPQQTQPPAKQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ*