CPSF4 cleavage and polyadenylation specific factor 4
Information
- Symbol
- CPSF4
- Type
- protein-coding
- Description
- cleavage and polyadenylation specific factor 4
- Entrez Gene ID
- 10898
- Genome
- hg19
- Position
- chr7:99,036,566-99,054,996
- Genome
- hg38
- Position
- chr7:99,438,943-99,457,373
- MIM
- 603052 OMIM
- HGNC
- HGNC:2327 HGNC
- Ensembl
- ENSG00000160917 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Uncertain significance | 0 | 2 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
4 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CPSF30 |
| SYNONYM | NAR |
| SYNONYM | NEB-1 |
| SYNONYM | NEB1 |
| MIM | 603052 OMIM |
| HGNC | HGNC:2327 HGNC |
| Ensembl | ENSG00000160917 Ensembl |
| AllianceGenome | HGNC:2327 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000292476.10 | hg38 | chr7 | 99,438,943 | 99,457,373 | 18,431 |
| ENST00000436336.6 | hg38 | chr7 | 99,438,922 | 99,457,342 | 18,421 |
| ENST00000451876.5 | hg38 | chr7 | 99,438,946 | 99,457,371 | 18,426 |
| ENST00000441580.5 | hg38 | chr7 | 99,439,376 | 99,456,589 | 17,214 |
| ENST00000436336.6 | hg19 | chr7 | 99,036,545 | 99,054,965 | 18,421 |
| ENST00000292476.10 | hg19 | chr7 | 99,036,566 | 99,054,996 | 18,431 |
| ENST00000451876.5 | hg19 | chr7 | 99,036,569 | 99,054,994 | 18,426 |
| ENST00000441580.5 | hg19 | chr7 | 99,036,999 | 99,054,212 | 17,214 |
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