ENST00000441580.5 CPSF4

Information
Transcript ID
ENST00000441580.5
Genome
hg38
Position
chr7:99,439,376-99,456,589
Strand
+
CDS length
576
Amino acid length
192
Gene symbol
CPSF4
Gene type
protein-coding
Gene description
cleavage and polyadenylation specific factor 4
Gene Entrez Gene ID
10898
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 99,439,376 99,439,596
2 99,444,789 99,444,839
3 99,448,121 99,448,273
4 99,450,276 99,450,371
5 99,450,702 99,450,795
6 99,452,368 99,452,440
7 99,454,041 99,454,136
8 99,456,432 99,456,589
CDS
Exon number Type Start Stop
3 CDS 99,448,126 99,448,273
4 CDS 99,450,276 99,450,371
5 CDS 99,450,702 99,450,795
6 CDS 99,452,368 99,452,440
7 CDS 99,454,041 99,454,136
8 CDS 99,456,432 99,456,500
Other genome
Genome Chromosome Start End Links
hg19 chr7 99,036,999 99,054,212 Link
CDS sequence
ATGTGTCCGTTTCGCCACATCAGTGGTGAGAAGACAGTTGTGTGCAAACACTGGCTGCGTGGCCTATGCAAGAAAGGGGACCAGTGTGAGTTCCTGCATGAGTATGACATGACCAAGATGCCCGAGTGCTACTTCTACTCCAAGTTCGGGGAGTGCAGCAACAAGGAATGTCCCTTCCTGCACATCGACCCCGAGTCCAAGATCAAGGACTGTCCTTGGTATGACCGTGGCTTCTGCAAGCACGGTCCCCTCTGCAGGCACCGGCACACACGGAGAGTCATCTGTGTGAATTACCTCGTGGGATTCTGCCCGGAGGGGCCCTCGTGTAAATTCATGCACCCTCGATTTGAACTGCCCATGGGAACCACCGAGCAGCCCCCACTGCCGCAGCAGACACAGCCTCCAGCAAAGCAGAGAACCCCGCAGGTCATCGGGGTCATGCAGAGTCAAAACAGCAGCGCGGGCAACCGGGGACCCCGGCCACTGGAGCAGGTCACCTGTTACAAGTGTGGCGAGAAAGGACACTACGCCAACAGATGCACCAAAGGGCACTTGGCCTTTCTCAGTGGACAGTGA
Amino sequence
MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPPLPQQTQPPAKQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ*