LRTM2 leucine rich repeats and transmembrane domains 2
Information
- Symbol
- LRTM2
- Type
- protein-coding
- Description
- leucine rich repeats and transmembrane domains 2
- Entrez Gene ID
- 654429
- Genome
- hg19
- Position
- chr12:1,929,731-1,945,919
- Genome
- hg38
- Position
- chr12:1,820,565-1,836,753
- HGNC
- HGNC:32443 HGNC
- Ensembl
- ENSG00000166159 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 6 |
| Uncertain significance | 0 | 44 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
50 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000299194.6 | hg38 | chr12 | 1,820,565 | 1,836,753 | 16,189 |
| ENST00000543818.5 | hg38 | chr12 | 1,820,267 | 1,836,752 | 16,486 |
| ENST00000535041.5 | hg38 | chr12 | 1,820,631 | 1,836,399 | 15,769 |
| ENST00000543818.5 | hg19 | chr12 | 1,929,433 | 1,945,918 | 16,486 |
| ENST00000299194.6 | hg19 | chr12 | 1,929,731 | 1,945,919 | 16,189 |
| ENST00000535041.5 | hg19 | chr12 | 1,929,797 | 1,945,565 | 15,769 |
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