ENST00000543818.5 LRTM2

Information
Transcript ID
ENST00000543818.5
Genome
hg38
Position
chr12:1,820,267-1,836,752
Strand
+
CDS length
1,113
Amino acid length
371
Gene symbol
LRTM2
Gene type
protein-coding
Gene description
leucine rich repeats and transmembrane domains 2
Gene Entrez Gene ID
654429
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 1,820,267 1,820,814
2 1,827,410 1,827,630
3 1,828,076 1,828,215
4 1,830,935 1,831,525
5 1,834,267 1,836,752
CDS
Exon number Type Start Stop
3 CDS 1,828,149 1,828,215
4 CDS 1,830,935 1,831,525
5 CDS 1,834,267 1,834,721
Other genome
Genome Chromosome Start End Links
hg19 chr12 1,929,433 1,945,918 Link
CDS sequence
ATGCTGGCGCCGGGCAGCAGCCCTGGGCAGAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCACCTGCTGGATCGCCCTGTATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCTGCCCCGCTCCATTTTCGGGGACCTGACGAATCTGACTGAGCTTCAGCTGCGCAATAACAGCATCAGGACCCTGGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCTTTTCGACGGGCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCCCTGGGAGTGTGACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTGGTTCTCCTACCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGCTGAGGGGGAAGGACATGCGGATGGTCCCCATGGAGATGTTCAACTACTGCTCCCAGCTGGAGGACGAGAATAGCTCAGCTGGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCCAAGCCCGGGGCTGAGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGTGAGGCGAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCGCTGCCTATGGCTGCATCTACGCCTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCTGATGGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGCCTGA
Amino sequence
MLAPGSSPGQRGRLALQWRQVSWITCWIALYAVEALPTCPFSCKCDSRSLEVDCSGLGLTTVPPDVPAATRTLLLLNNKLSALPSWAFANLSSLQRLDLSNNFLDRLPRSIFGDLTNLTELQLRNNSIRTLDRDLLRHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQNLDRLTFEPLANLQLLQVGDNPWECDCNLREFKHWMEWFSYRGGRLDQLACTLPKELRGKDMRMVPMEMFNYCSQLEDENSSAGLDIPGPPCTKASPEPAKPKPGAEPEPEPSTACPQKQRHRPASVRRAMGTVIIAGVVCGVVCIMMVVAAAYGCIYASLMAKYHRELKKRQPLMGDPEGEHEDQKQISSVA*