SPATA20 spermatogenesis associated 20

Information
Symbol
SPATA20
Type
protein-coding
Description
spermatogenesis associated 20
Entrez Gene ID
64847
Genome
hg19
Position
chr17:48,624,535-48,633,213
Genome
hg38
Position
chr17:50,547,174-50,555,852
MIM
613939 OMIM
HGNC
HGNC:26125 HGNC
Ensembl
ENSG00000006282 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Likely benign 0 6
Uncertain significance 0 124
Ranking
ClinVar
0
0
0
130
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM HEL-S-98
SYNONYM SSP411
SYNONYM Tisp78
MIM 613939 OMIM
HGNC HGNC:26125 HGNC
Ensembl ENSG00000006282 Ensembl
AllianceGenome HGNC:26125
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000356488.8 hg38 chr17 50,547,126 50,555,852 8,727
ENST00000634597.1 hg38 chr17 50,548,049 50,555,852 7,804
ENST00000006658.11 hg38 chr17 50,547,174 50,555,852 8,679
ENST00000356488.8 hg19 chr17 48,624,487 48,633,213 8,727
ENST00000006658.11 hg19 chr17 48,624,535 48,633,213 8,679
ENST00000634597.1 hg19 chr17 48,625,410 48,633,213 7,804
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