SMG9 SMG9 nonsense mediated mRNA decay factor

Information
Symbol
SMG9
Type
protein-coding
Description
SMG9 nonsense mediated mRNA decay factor
Entrez Gene ID
56006
Genome
hg19
Position
chr19:44,232,135-44,259,114
Genome
hg38
Position
chr19:43,727,983-43,754,962
MIM
613176 OMIM
HGNC
HGNC:25763 HGNC
Ensembl
ENSG00000105771 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 8
Likely pathogenic 0 6
Benign 0 14
Likely benign 0 46
association 0 2
Conflicting classifications of pathogenicity 0 2
not provided 1 0
Uncertain significance 0 76
Ranking
ClinVar
0
0
6
134
8
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM C19orf61
SYNONYM F17127_1
SYNONYM HBMS
SYNONYM NEDITPO
MIM 613176 OMIM
HGNC HGNC:25763 HGNC
Ensembl ENSG00000105771 Ensembl
AllianceGenome HGNC:25763
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000601170.5 hg38 chr19 43,732,270 43,754,962 22,693
ENST00000270066.11 hg38 chr19 43,727,983 43,754,962 26,980
ENST00000270066.11 hg19 chr19 44,232,135 44,259,114 26,980
ENST00000601170.5 hg19 chr19 44,236,422 44,259,114 22,693
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