LIME1 Lck interacting transmembrane adaptor 1

Information
Symbol
LIME1
Type
protein-coding
Description
Lck interacting transmembrane adaptor 1
Entrez Gene ID
54923
Genome
hg19
Position
chr20:62,368,016-62,370,456
Genome
hg38
Position
chr20:63,736,664-63,739,103
MIM
609809 OMIM
HGNC
HGNC:26016 HGNC
Ensembl
ENSG00000203896 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Uncertain significance 0 36
Ranking
ClinVar
0
0
0
36
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LIME
SYNONYM dJ583P15.4
MIM 609809 OMIM
HGNC HGNC:26016 HGNC
Ensembl ENSG00000203896 Ensembl
AllianceGenome HGNC:26016
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000487026.5 hg38 chr20 63,736,657 63,738,674 2,018
ENST00000480139.5 hg38 chr20 63,736,669 63,738,805 2,137
ENST00000309546.8 hg38 chr20 63,736,664 63,739,103 2,440
ENST00000487026.5 hg19 chr20 62,368,009 62,370,027 2,019
ENST00000309546.8 hg19 chr20 62,368,016 62,370,456 2,441
ENST00000480139.5 hg19 chr20 62,368,021 62,370,158 2,138
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