ENST00000309546.8 LIME1

Information
Transcript ID
ENST00000309546.8
Genome
hg38
Position
chr20:63,736,664-63,739,103
Strand
+
CDS length
888
Amino acid length
296
Gene symbol
LIME1
Gene type
protein-coding
Gene description
Lck interacting transmembrane adaptor 1
Gene Entrez Gene ID
54923
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 63,736,664 63,736,712
2 63,737,533 63,737,647
3 63,737,821 63,737,902
4 63,737,973 63,738,060
5 63,738,183 63,738,499
6 63,738,598 63,739,103
CDS
Exon number Type Start Stop
2 CDS 63,737,550 63,737,647
3 CDS 63,737,821 63,737,902
4 CDS 63,737,973 63,738,060
5 CDS 63,738,183 63,738,499
6 CDS 63,738,598 63,738,900
Other genome
Genome Chromosome Start End Links
hg19 chr20 62,368,016 62,370,456 Link
CDS sequence
ATGGGGCTGCCAGTGTCCTGGGCCCCTCCTGCCCTCTGGGTTCTAGGGTGCTGCGCCCTGCTCCTCTCGCTGTGGGCGCTGTGCACAGCCTGCCGCAGGCCCGAGGACGCTGTAGCCCCCAGGAAGAGGGCGCGGAGGCAGCGGGCGAGGCTGCAGGGCAGTGCGACGGCGGCGGAAGCGTCCCTACTGAGGCGGACCCACCTCTGCTCCCTCAGCAAGTCGGACACCAGACTGCACGAGCTGCACCGGGGCCCGCGCAGCAGCAGGGCCCTGCGGCCTGCCAGCATGGATCTCCTGCGCCCACACTGGCTGGAGGTGTCCAGGGACATCACCGGACCGCAGGCAGCCCCCTCTGCCTTCCCACACCAGGAGCTGCCCCGGGCTCTGCCGGCAGCTGCAGCCACCGCAGGGTGCGCTGGCCTCGAGGCCACCTATTCCAACGTGGGGCTGGCGGCCCTTCCCGGGGTCAGCCTGGCGGCCAGCCCTGTGGTGGCCGAGTATGCCCGCGTCCAGAAGCGCAAAGGGACCCATCGCAGTCCCCAAGAGCCACAGCAGGGGAAGACTGAGGTGACCCCGGCCGCTCAGGTGGACGTCCTGTACTCCAGGGTCTGCAAGCCTAAAAGGAGGGACCCAGGACCCACCACAGACCCGCTGGACCCCAAGGGCCAGGGAGCGATTCTGGCCCTGGCGGGTGACCTGGCCTACCAGACCCTCCCGCTCAGGGCCCTGGATGTGGACAGCGGCCCCCTGGAAAACGTGTATGAGAGCATCCGGGAGCTGGGGGACCCTGCTGGCAGGAGCAGCACGTGCGGGGCTGGGACGCCCCCTGCTTCCAGCTGCCCCAGCCTAGGGAGGGGCTGGAGACCCCTCCCTGCCTCCCTGCCCTGA
Amino sequence
MGLPVSWAPPALWVLGCCALLLSLWALCTACRRPEDAVAPRKRARRQRARLQGSATAAEASLLRRTHLCSLSKSDTRLHELHRGPRSSRALRPASMDLLRPHWLEVSRDITGPQAAPSAFPHQELPRALPAAAATAGCAGLEATYSNVGLAALPGVSLAASPVVAEYARVQKRKGTHRSPQEPQQGKTEVTPAAQVDVLYSRVCKPKRRDPGPTTDPLDPKGQGAILALAGDLAYQTLPLRALDVDSGPLENVYESIRELGDPAGRSSTCGAGTPPASSCPSLGRGWRPLPASLP*