HDDC2 HD domain containing 2
Information
- Symbol
- HDDC2
- Type
- protein-coding
- Description
- HD domain containing 2
- Entrez Gene ID
- 51020
- Genome
- hg19
- Position
- chr6:125,596,496-125,623,113
- Genome
- hg38
- Position
- chr6:125,275,350-125,301,967
- HGNC
- HGNC:21078 HGNC
- Ensembl
- ENSG00000111906 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 2 |
| Uncertain significance | 0 | 34 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
36 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C6orf74 |
| SYNONYM | CGI-130 |
| SYNONYM | NS5ATP2 |
| SYNONYM | dJ167O5.2 |
| HGNC | HGNC:21078 HGNC |
| Ensembl | ENSG00000111906 Ensembl |
| AllianceGenome | HGNC:21078 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000608284.1 | hg38 | chr6 | 125,297,487 | 125,302,078 | 4,592 |
| ENST00000608295.5 | hg38 | chr6 | 125,275,882 | 125,301,937 | 26,056 |
| ENST00000398153.7 | hg38 | chr6 | 125,275,350 | 125,301,967 | 26,618 |
| ENST00000398153.7 | hg19 | chr6 | 125,596,496 | 125,623,113 | 26,618 |
| ENST00000608295.5 | hg19 | chr6 | 125,597,028 | 125,623,083 | 26,056 |
| ENST00000608284.1 | hg19 | chr6 | 125,618,633 | 125,623,224 | 4,592 |
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