ENST00000608295.5 HDDC2
Information
- Transcript ID
- ENST00000608295.5
- Genome
- hg38
- Position
- chr6:125,275,882-125,301,937
- Strand
- -
- CDS length
- 327
- Amino acid length
- 109
- Gene symbol
- HDDC2
- Gene type
- protein-coding
- Gene description
- HD domain containing 2
- Gene Entrez Gene ID
- 51020
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 125,275,882 | 125,276,243 |
| 4 | 125,277,102 | 125,277,240 |
| 3 | 125,298,650 | 125,298,816 |
| 2 | 125,300,538 | 125,300,659 |
| 1 | 125,301,849 | 125,301,937 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 125,298,696 | 125,298,816 |
| 2 | CDS | 125,300,538 | 125,300,659 |
| 1 | CDS | 125,301,849 | 125,301,932 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 125,597,028 | 125,623,083 | Link |
CDS sequence
ATGGCTTCGGTCTCCTCTGCGACCTTCTCGGGCCACGGGGCTCGGTCCCTACTGCAGTTCCTGCGGCTGGTAGGGCAGCTCAAGAGAGTCCCACGAACTGGCTGGGTATACAGAAATGTCCAGAGGCCGGAGAGCGTTTCAGATCACATGTACCGGATGGCAGTTATGGCTATGGTGATCAAAGATGACCGTCTTAACAAAGACCGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAATGCATCGTTGGGGACATAGCACCAGCAGATAACATCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGTCAGTGTTGACTATTGA
Amino sequence
MASVSSATFSGHGARSLLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKDDRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEVSVDY*