PDZRN4 PDZ domain containing ring finger 4

Go to:

Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
Genome browser

Information

Symbol: PDZRN4
Type: protein-coding
Description: PDZ domain containing ring finger 4
Entrez Gene ID: 29951
Genome: hg19
Position: chr12:41,582,122-41,968,547
Genome: hg38
Position: chr12:41,188,320-41,574,745
MIM: 609730 OMIM
HGNC: HGNC:30552 HGNC
Ensembl: ENSG00000165966 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Likely benign	0	2
Uncertain significance	0	136

Ranking

	ClinVar
	0
	0
	0
	138
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	LNX4
SYNONYM	SAMCAP3L
MIM	609730 OMIM
HGNC	HGNC:30552 HGNC
Ensembl	ENSG00000165966 Ensembl
AllianceGenome	HGNC:30552

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000298919.7	hg38	chr12	41,437,739	41,574,582	136,844
ENST00000402685.7	hg38	chr12	41,188,320	41,574,745	386,426
ENST00000539469.6	hg38	chr12	41,437,683	41,574,332	136,650
ENST00000649474.1	hg38	chr12	41,437,680	41,574,724	137,045
ENST00000402685.7	hg19	chr12	41,582,122	41,968,547	386,426
ENST00000649474.1	hg19	chr12	41,831,482	41,968,526	137,045
ENST00000539469.6	hg19	chr12	41,831,485	41,968,134	136,650
ENST00000298919.7	hg19	chr12	41,831,541	41,968,384	136,844

Genome browser