ENST00000649474.1 PDZRN4

Information
Transcript ID
ENST00000649474.1
Genome
hg38
Position
chr12:41,437,680-41,574,724
Strand
+
CDS length
2,145
Amino acid length
715
Gene symbol
PDZRN4
Gene type
protein-coding
Gene description
PDZ domain containing ring finger 4
Gene Entrez Gene ID
29951
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 41,437,680 41,438,013
2 41,459,951 41,460,070
3 41,506,456 41,506,712
4 41,509,811 41,509,913
5 41,552,656 41,552,754
6 41,555,698 41,555,760
7 41,563,548 41,563,649
8 41,567,783 41,567,899
9 41,572,364 41,574,724
CDS
Exon number Type Start Stop
3 CDS 41,506,579 41,506,712
4 CDS 41,509,811 41,509,913
5 CDS 41,552,656 41,552,754
6 CDS 41,555,698 41,555,760
7 CDS 41,563,548 41,563,649
8 CDS 41,567,783 41,567,899
9 CDS 41,572,364 41,573,890
Other genome
Genome Chromosome Start End Links
hg19 chr12 41,831,482 41,968,526 Link
CDS sequence
ATGGCTTCAGAAGTGCAGCTTATGAATGCCAGCACTCAGACGGACATCACCTTCGAACACATCATGGCTCTGGCCAAGCTTCGTCCACCTACCCCTCCAGTGCCAGACATCTGTCCATTCCTGCTCTCAGACAGCTGCCATTCTCTACATCCAATGGAGCATGAATTTTATGAGGACAATGAGTATATTTCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGACTTTGAATATGAGGAGGTCGAGTTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTGACAGTCTGTTACCGAACAGATGATGAAGAAGACACCGGCATTTATGTCAGCGAGGTTGACCCAAATAGCATTGCTGCCAAAGACGGCCGGATTCGAGAAGGGGATCGGATTTTGCAAATAAATGGGGAAGATGTCCAGAATCGAGAAGAAGCAGTGGCCTTGCTGTCTAACGATGAGTGTAAGAGAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTGGCTGGAAGATGAAAGGAATGAATTCTTAGAGGAGTTAAACTTGGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCCAAAAAAGCAAGAAGAAGAAGAAGGCACAACAGACACTGCAACATCCTCATCCAACAACCATGAGAAGGACAGTGGAGTAGGACGTACAGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCTCGTATCTGGTGAATACATTGACTCAGACTGCATTGGCAACCCAGATGAGGACTGTGAAAGATTCAGGCAGCTCTTGGAGCTCAAATGCAAGATTCGAAATCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGCATGAGCTACAGTTGCTTAATGAAGAACTGAGAAACATTGAGCTTGAGTGTCAGAATATCATGCAGGCTCACAGGCTCCAGAAAGTGACAGACCAGTATGGAGACATCTGGACATTGCATGATGGAGGATTCCGGAATTATAACACCAGCATAGATATGCAAAGGGGAAAGCTAGATGACATCATGGAGCATCCAGAAAAGTCTGACAAGGACAGTTCTAGTGCTTACAACACAGCTGAGAGCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATCAAGAGAAGGCAGTCAGCGAACACATCCCTTACCTCTCTCCTTACCACAGCTCCTCATATAGATATGCAAACATCCCAGCACACGCCCGGCATTATCAAAGCTACATGCAGTTAATTCAACAGAAATCTGCAGTCGAGTATGCTCAGAGTCAGCTCAGCTTGGTGAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAATGGAAGGTGAAAATTAGGAGCGACGGGACACGGTACATCACAAAGAGACCCGTGCGAGACCGAATCCTGAAGGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTGGCATGACCACAGACGATGACACCATGAGCGAGATGAAAATGGGGCGCTACTGGAGCAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGCCAAAGAGCAGCGCCGTCGCCGTGAGTTCATGATGCGAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGAGCGGCAGTGAGGGCAAGAAGGAGATCAATATCATTGAACTGAGTCACAAAAAGATGATGAAAAAGAGAAACAAGAAAATTTTGGACAACTGGATGACAATCCAAGAACTGATGACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTCGGTGACCACTGTATGA
Amino sequence
MASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHSLHPMEHEFYEDNEYISSLPADADRTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSNDECKRIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQPTANEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSKRDLGQSQDTLGSVELQYNESLVSGEYIDSDCIGNPDEDCERFRQLLELKCKIRNHGEYDLYYSSSTIECNQGEQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWTLHDGGFRNYNTSIDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAATQSSSGQSSKESTSTKAKTTEQGCSAESKEKVLEGSKLPDQEKAVSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV*